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Detailed information on CNT30289849


BLAST search results

BLAST vs Swiss-Prot:
sp|P36886|PSAK_HORVU, E-value = 2e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694964Triticum aestivumOryza sativa2515.7493.14102forward
CNT30520562Triticum aestivumSetaria italica37.2533.9392.11152forward
CNT30436322Triticum aestivumAegilops tauschii99.0295.51100404forward
CNT30242614Triticum aestivumAvena sativa44.8551.2690.71183forward
CNT30659915Triticum aestivumTriticum dicoccoides88.4899.4597.78361forward
CNT3059741Triticum aestivumArabidopsis lyrata31.3740.1381.25128forward
CNT30611008Triticum aestivumArabis alpina34.3152.8380140forward
CNT30325346Triticum aestivumAsparagus officinalis34.829.8984.51142forward
CNT30102731Triticum aestivumOryza rufipogon37.2531.0292.11152forward
CNT30581501Triticum aestivumEchinochloa crusgalli35.5432.6693.79145forward
CNT30118070Triticum aestivumOryza nivara23.7717.3593.8197forward

Expression of CNT30289849

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MIWSRTPEPHASVSASVKPAGSPVCSPDSRASSLSPAVAFLFADGASPNRPANSIRVV

>peptide 2 (65 aa)
MMKNAWDEAVATPARRYVPLNQRCIHIHCTTPHHQITKGALIDPLHGARDVDAEQLSTEKEGSSR*

Sequence

>CNT30289849
TAGCACAAGACGATCTTCACCGTGTGAAAGATACTATAGATGATGAAAAACGCATGGGATGAAGCAGTTGCCACACCGGCGCGGCGGTACGTCCCGCTGA
ACCAAAGATGCATACACATACATTGTACTACACCACATCATCAAATCACAAAGGGAGCATTAATTGATCCACTACATGGAGCGCGCGATGTGGATGCAGA
ACAGCTATCGACGGAAAAGGAAGGTTCTAGCCGATGATCTGGTCTAGGACGCCGGAGCCGCATGCGAGCGTGTCGGCGAGCGTGAAGCCGGCCGGGTCGC
CCGTCTGCAGCCCGGACTCGCGCGCCTCCAGCTTGAGCCCCGCCGTCGCCTTCCTGTTCGCCGACGGCGCCAGCCCGAACCGCCCGGCGAACAGCATCAG
GGTCGTCG