« Back to Triticum aestivum search


Detailed information on CNT30289785


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30436129Triticum aestivumAegilops tauschii29.9734.8199.09110forward
CNT30366141Triticum aestivumSorghum bicolor27.5214.5795.05101forward
CNT30576176Triticum aestivumOryza barthii40.3344.3197.97148forward
CNT30116652Triticum aestivumOryza nivara40.3341.6997.97148forward

Expression of CNT30289785

Peptides detected in this lncRNA

>peptide 1 (76 aa)
RLYYHYYYSTTHAAVPSHTYTAVHTVVYVRVSLVRGHRREQATTTVFMDGRTDGRTDGGSSAAATLATRQLKAASS*

>peptide 2 (73 aa)
TLLSLLLFHYSRGRPIAHVHGRTHGRLRESKLGAGTPQRTGNDDSIHGRTDGRTDRRRVVRGGHPGDEAAKSC*

Sequence

>CNT30289785
CGACTTTATTATCATTATTATTATTCCACTACTCACGCGGCCGTCCCATCGCACACGTACACGGCCGTACACACGGTCGTTTACGTGAGAGTAAGCTTGG
TGCGGGGACACCGCAGAGAACAGGCAACGACGACAGTATTCATGGACGGACGGACGGACGGACGGACAGACGGAGGGTCGTCCGCGGCGGCCACCCTGGC
GACGAGGCAGCTAAAAGCTGCTAGTTCTTGAGGAGGTAGTCGTCGAGGTCGTGGAAGTTCTTGTAGAAGCTCACCAGCTCGCCGTCCACCACGCTGTACG
ACACCACCTTCTTCTCGTCGTCCGCCACCTCCACCTTCTCCTTGGCGAACGTCACCATCGGAACCCC