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Detailed information on CNT30278532

BLAST search results

BLAST vs Swiss-Prot:
sp|P29402|CALX1_ARATH, E-value = 1e-157

BLAST vs NONCODE:
NONZMAT001268, E-value = 8e-109

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30676366	Chenopodium quinoa	Setaria viridis	20.29	57.03	85.2	223	forward
CNT30517641	Chenopodium quinoa	Juglans regia	48.77	99.63	82.65	536	forward
CNT30629049	Chenopodium quinoa	Vigna unguiculata	60.78	58.39	81.29	668	forward
CNT3043981	Chenopodium quinoa	Prunus dulcis	6.92	21.59	85.53	76	forward
CNT30164689	Chenopodium quinoa	Pistacia vera	16.83	33.64	84.86	185	forward
CNT30190468	Chenopodium quinoa	Secale cereale	50.5	57.39	81.26	555	forward
CNT30395817	Chenopodium quinoa	Triticum turgidum	43.59	61.97	80.38	479	forward
CNT30561418	Chenopodium quinoa	Actinidia chinensis	37.03	40.38	82.56	407	forward
CNT30144977	Chenopodium quinoa	Medicago truncatula	26.66	31.81	82.59	293	forward
CNT30140632	Chenopodium quinoa	Lolium perenne	13.56	73.04	83.22	149	forward
CNT30605054	Chenopodium quinoa	Gossypium raimondii	37.85	73.37	84.13	416	forward
CNT30126269	Chenopodium quinoa	Corymbia citriodora	17.83	51.72	83.67	196	forward
CNT30686114	Chenopodium quinoa	Triticum urartu	27.75	51	83.28	305	forward
CNT30349705	Chenopodium quinoa	Eragrostis tef	25.3	39.66	84.17	278	forward
CNT30120413	Chenopodium quinoa	Citrus clementina	27.48	37.33	84.44	302	forward
CNT3038556	Chenopodium quinoa	Cucumis melo	29.39	40.89	81.73	323	forward
CNT30149228	Chenopodium quinoa	Brachypodium distachyon	33.21	76.84	81.37	365	forward
CNT30101562	Chenopodium quinoa	Oryza rufipogon	30.48	38.77	81.79	335	forward
CNT30585446	Chenopodium quinoa	Echinochloa crusgalli	14.01	50.99	87.01	154	forward
CNT30116414	Chenopodium quinoa	Oryza nivara	11.01	43.21	87.6	121	forward
CNT30333676	Chenopodium quinoa	Cynara cardunculus	21.29	45.35	82.05	234	forward
CNT30725707	Chenopodium quinoa	Lupinus angustifolius	27.75	55.35	82.3	305	forward

Expression of CNT30278532

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MVFNIFSTLWVLVLQNEVNLVCGPTFVRPKHDRIW*

>peptide 2 (37 aa)
MIAGSKSSPKRRFALFFSSPSTKILTSLSGVKTAVYT*

>peptide 3 (37 aa)
MPQDHQFPLVHHPTIPQVSQLPHLQFPLVHSHPNHQV*

>peptide 4 (47 aa)
MPLPLVSRVSLHWPLPFTTARCFFTLGILNFWCLPFTILFIIPVFRF*

>peptide 5 (67 aa)
ECLKWHLAGQLLPQPSVSLSLPRTLASIGSACMIQLSFHPRQSKCCQTICRLAWSISQYQWQQLAQS*

>peptide 6 (73 aa)
MPEMASGWPAASSAFCFSFSASNFGFHWVCLYDSAVFSSSAIKMLSNNMPSCMVHISIPMAAIGSKLGVSSSK*

Sequence

>CNT30278532
CTGAATGCCTGAAATGGCATCTGGCTGGCCAGCTGCTTCCTCAGCCTTCTGTTTCTCTTTCTCTGCCTCGAACTTTGGCTTCCATTGGGTCTGCCTGTAT
GATTCAGCTGTCTTTTCATCCTCGGCAATCAAAATGTTGTCAAACAATATGCCGTCTTGCATGGTCCATATCTCAATACCAATGGCAGCAATTGGCTCAA
AGTTAGGAGTGTCAAGCTCAAAGTAGTTAGGGTTAGGAATTTCTTGTGGCTTCCAAATACCCTTATAGTTTGGGTTGTCAATTAGTGGAGCATGCCACTT
CCCCTTGTAAGCCGGGTTAGCCTTCATTGGCCTCTTCCATTCACCACAGCCAGGTGCTTCTTCACACTTGGGATTCTCAATTTTTGGTGCCTCCCATTCA
CCATCCTCTTCATCATCCCAGTCTTCAGGTTTTGATGCCTCAGGATCATCAATTTCCTCTGGTTCATCATCCAACCATCCCTCAGGTTTCTCAGCTTCCT
CATCTTCAATTTCCATTGGTGCACTCTCATCCCAATCATCAGGTTTAACTGCCGCTGGGTCAGGAATCTTTTCCCTCTCATCCCAGTCCTCAGGCTTCTT
ATCTTCTGGGTCAGGAATAGTCTTTGGTGGGATGATAGCTGGTTCAAAATCATCACCTAAAAGGAGGTTTGCCCTCTTCTTCTCCTCTCCGTCAACCAAG
ATCCTCACCTCATTGTCAGGGGTCAAAACAGCAGTGTACACATGAGTTAACTTATCAGATGGGACAGATGGAGGAAATTTAAGATGGTGTTCAACATATT
CTCCACTCTTTGGGTTCTTGTGCTTCAGAATGAAGTGAACCTTGTTTGTGGACCCACATTTGTCAGGCCCAAACATGATAGAATATGGTGACTCATTATC
AAACTCCTTTGGCACCCAACCAGCTTCCTGAGGACGGAGATATTTCAAGTAGGCGAGTTTCGAATTGAAGAACAACATTTTTTCCCTTCAATTCAACAGG
TTCTTCAAGTTCTTTCACAATGGCGTACTTTCTTGCCTTCTCACTGACTAGAAGCCCATAATCTTCATGCCCCTCACTTTTTGCGTGCTTCCATACACC