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Detailed information on CNT30272606


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-165

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3097361Chenopodium quinoaSolanum tuberosum55.1798.7883.471131forward
CNT30423866Chenopodium quinoaPapaver somniferum55.3788.7482.731135forward

Expression of CNT30272606

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MVLPVRVLTKICICRQIISKSIIAQKGLYWTDHIVKPNNYL*

>peptide 2 (40 aa)
MVSELSISRVIVFPVRVFTKICMPPLRRRTRWSVDSFWML*

>peptide 3 (38 aa)
MLCGKLRSSMNCKTIRPNKKQFEARKLTTNSYSKSENY*

>peptide 4 (37 aa)
MVSELSTSKVIVFPVKVLTNICIPLLKRSTRWRVDSF*

>peptide 5 (30 aa)
PKKRTRKLDIVPRNLCYGLLNKVKTMATKA*

>peptide 6 (37 aa)
MLAINSAITDYIHQSQIIANTSNNPIYNPIYIINGQL*

Sequence

>CNT30272606
TGCCTAAAAAAAGAACACGGAAATTAGATATTGTTCCAAGAAACCTCTGCTACGGATTACTAAACAAAGTAAAAACAATGGCCACAAAAGCTTAAAACCA
CAGCGATCTCAACCAGACATCATTAAAAGCCACCACGGTGACGAAGGACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAAGTGCGCCC
GTCCTCCAACTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGTATATCTTAGTCTTGACATTATCGATAGTATCTG
AGCTCTCAACCTCCAAGGTGATGGTTTTCCCAGTCAAGGTCTTAACAAATATTTGCATTCCTCCTCTTAAACGAAGCACCAAGTGAAGTGTAGACTCCTT
TTGGATATTGTAGTCAGCAAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATCAACCTTTGCTGATCTGGGGGAATGCCCTCCTTATCTTGAATC
TTTGCCTTGACATTGTCAATGGTGTCTGAACTCTCGACCTCCAAAGTGATCGTCTTCCCAGTCAAAGTCTTGACGAATATTTGCATTCCACTTCTTAAAC
GGAGTACAAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCAGCAAGGGTGCGCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTC
AGGGGGAATGCCTTCCTTATCTTGAATTTTGGTTTTGACATTGTCAATGGTGTCGGAACTTTCAATCTCAAGGGTGATAGTCTTCCCGGTGAGGGTCTTC
ACAAAGATCTGCATGCCACCTCTTAGACGGAGAACCAGGTGGAGTGTCGACTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGGCCATCTTCAAGCTGCT
TTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCTTTGTCTTGAATTTTTGTTTTGACATTATCAATAGTGTCAGAACTCTCAACTTCAAG
GGTGATAGTCTTCCCGGTGAGGGTCTTAACAAAAATCTGCATCCCCCCTCTAAGACGGAGAACAAGGTGGAGGGTCGATTCTTTCTGAATATTGTAGTCA
GCGAGTGTTCTGCCATCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTATCTTGAATCTTCGTCTTAACATTGT
CGATTGTGTCAGAACTCTCAACCTCGAGAGTTATGGTTTTGCCGGTAAGAGTCTTAACAAAGATTTGCATCTGCAGACAAATCATAAGCAAATCAATAAT
TGCACAGAAGGGATTATATTGGACTGATCATATTGTTAAACCAAACAATTACCTATAATCAACCCAATCAAAGCAACATATGTAAACCAGCAATGCTTGC
AATAAATTCAGCCATAACAGATTATATTCATCAATCTCAGATAATCGCTAACACAAGTAATAATCCAATATATAATCCAATATACATAATCAATGGTCAA
TTATAGAGCTTAGCATATATAAATAAATTTTAAATAAATAAATAAATAAATAACCCTAAAATACCTAACAGAAATTTAATTACCTAATTAAATAATAACA
ATCGACCATTATAACACGAACTCAATTCGAATAACAAAACCCTAAAAAGATGCTGTGTGGAAAATTAAGAAGTTCAATGAATTGTAAAACAATTAGACCT
AACAAAAAGCAATTTGAAGCTAGAAAATTAACAACAAACAGCTATTCAAAGTCAGAAAATTACTAACAACAGCAATTCGAAGCCAGAAAATTATCAACAA
ACAGCAATTGAAAGCCAGAAAAATATTAATCAGAGAAAAGCATCTCAAATCAGCGGCTATATATGCAGATCTATTCATGAAATAGAATCGGGTGTATTTC
AAATCAATTAGATCCAAGATTAATCGACAAACAACTTTCAGATTTTAGGTCGACGAGACCAACAATTCAGGATTCAAAATTCAATCAAATAAATCAATTG
CTTCAATTAAAATTAAAGAAAGAGATAAACAACGCATAATAATACGATAG