Detailed information on CNT30257614


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697771Avena sativaOryza sativa14.8420.2593.8565forward
CNT30439146Avena sativaAegilops tauschii94.7595.484.1415forward
CNT30352984Avena sativaEragrostis tef41.3230.9484.53181forward

Expression of CNT30257614

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MFFKCQTGTPSVASHRRHPVCRHRTRTHWRHAHPAHRRHAHSAHRRRTAHARWSRQGEREQLGIHVL

>peptide 2 (32 aa)
MPNWNTLSSFPSEASRMQASDQDPLEACPSRP*

>peptide 3 (35 aa)
MPIPPIGGMPIPPIGGGPPMPGGAGKARGSNWAYMF

Sequence

>CNT30257614
CTCCGCCTCTCCTTCTTCTTCAGCTCAACCTAATCATCCTCATCCTACCCGACCATAATATACTGTAACCAGTAAATTTACTCGGTACCTCGGCTAGGGG
TATTGCTCGCCAAAATTGTTGTCCTGGTACCAAAAGAATATTAATCGAAAAACCAATAGCCCAAATCTACAACTTCAAAGATACCTCGGGATCAGCGTGC
TTCCCATCTGTGTAAACTGAAACAATCAACATCATCTATGTTCTTCAAATGCCAAACTGGAACACCCTCAGTAGCTTCCCATCGGAGGCATCCCGTATGC
AGGCATCGGACCAGGACCCATTGGAGGCATGCCCATCCCGCCCATAGGAGGCATGCCCATTCCGCCCATCGGAGGAGGACCGCCCATGCCAGGTGGAGCA
GGCAAGGCGAGAGGGAGCAATTGGGCATACATGTTCTG