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Detailed information on CNT30238771


BLAST search results

BLAST vs Swiss-Prot:
sp|I1HNB2|RVR1_BRADI, E-value = 3e-17

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316498Brassica oleraceaCorylus avellana46.7553.7382.78180forward

Expression of CNT30238771

Peptides detected in this lncRNA

>peptide 1 (74 aa)
IDIILISEPPNRLVHNIINPPANKRRDSRWEFNAFGKKGNFTRMKQRRSRYLILVKGIKDLVRLSLQKDALAKL*

Sequence

>CNT30238771
CATCGATATAATCTTGATCAGTGAGCCACCAAATAGACTCGTTCATAACATCATAAACCCTCCAGCAAACAAACGAAGAGATTCCAGATGGGAGTTCAAC
GCCTTTGGGAAGAAAGGTAACTTTACACGGATGAAGCAAAGACGCAGCCGGTATCTCATCCTCGTGAAAGGAATAAAAGATCTCGTTAGGCTGAGCCTCC
AAAAGGACGCCCTTGCCAAGCTTTAACTCACCGGGTCGATACAGCCAATTCACACGAACCTTAAAGCTGCCTCCTTCTCGTTCCGGGACCAGCAAACGGA
TCAAACCAACGAACGGTGGACAATCCTGAGGTGGCTTGAACAGAGCACAGTCACCAACACTAATCCTCCTCCCGTCCTGCGAAAA