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Detailed information on CNT30236598


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3073470Brassica oleraceaBrassica juncea40.1429.1289.82226forward

Expression of CNT30236598

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MPCSNRKKASFTLNDCLHSNITNLKPKILCEYYTRNIIID*

>peptide 2 (29 aa)
MIVAKSYLPPLKSDNHIGNIILFQLLILA*

>peptide 3 (33 aa)
SRYLLMSTDIINKKRKQSSFRHQFANSKKKNSL*

Sequence

>CNT30236598
CCAGTCGTTATCTTTTGATGTCAACCGACATCATTAACAAAAAAAGAAAACAATCTTCTTTCAGACATCAGTTTGCAAACTCAAAAAAAAAAAATTCTCT
TTAATGGCGATTGTAGAGAGTTATCGAGTCATGGACGATCTGATTCAGCTTCATCTCCAGGATCTGAGGCAGTCAAAGAAAGATTAATCTGAAATCGTTC
GTTTTGGTATTCATCTGACAAAACTCCAAAGGTTTGTCACTTGATATGCCATGCTCCAACCGGAAGAAGGCTTCCTTTACTCTCAATGATTGCTTACATT
CTAACATTACCAATTTGAAACCAAAGATATTATGTGAGTATTATACACGAAATATAATTATAGATTGAATTTTTTTAAACCGTGAATGTAGCTTAAACGT
ATATTCGTTTTCTATATTTGGTTATACATTTACTTGCACCATGATTGTAGCTAAATCGTACCTTCCACCTTTAAAGTCGGATAATCACATAGGGAATATT
ATATTGTTTCAATTATTAATACTTGCCTAATCCTGTGATCTTAAAAGGCATACCTTCCTCTAC