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Detailed information on CNT30235516


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30543403Brassica oleraceaBrassica napus37.0520.7482.26186forward
CNT3077644Brassica oleraceaBrassica juncea61.9528.0988.42311forward
CNT30263765Brassica oleraceaBrassica rapa65.148.2587.77327forward

Expression of CNT30235516

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MNQPSVFPWFQVAEDDRLFIRTSRCLDLHRRCNILSSHWFVFWFIRRCDFE*

Sequence

>CNT30235516
CGATAAGCTCCACCAGCAGGAGTAATCTGGAAATTCTGGATGTAGCGCCATGCTCAAACCGTAAGAATCCTTCCCTTACTTTCAATTAACGAACGCTTAC
AATCTCATCAGCCAAGACGAATTCCATGGTCTCCACGGATTGAATGTATTGTTTCCAAGCGTGTAGAACCTTTACATGAACCAACCAAGTGTTTTTCCAT
GGTTTCAAGTCGCCGAAGACGACAGATTGTTCATTAGGACCTCTCGATGCTTGGATTTGCATCGAAGGTGCAATATTCTTAGTAGCCATTGGTTTGTTTT
TTGGTTTATTCGAAGGTGTGACTTTGAATAGGAACCTGGTGCTGCCTATTTATAATATTGATCGGATTCAAAGCGAGGTGTTAGGTTTAGGCGAAACTTG
GGAAGAAAGTTGGGGGATCTCGACTTGGAAAATCGAATCTCTCTATATTTTAAGATGAGTTTTTGGAAAATTCAATTACCATGTCAAACAGTCAATATTT
TT