Detailed information on CNT30226134


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184327Hordeum vulgareSecale cereale13.6375.5993.17161forward
CNT30304883Hordeum vulgareTriticum aestivum28.731.2792.04339forward
CNT30398990Hordeum vulgareTriticum turgidum24.7268.2291.1292forward
CNT30443932Hordeum vulgareAegilops tauschii34.0428.3789.3402forward
CNT30668156Hordeum vulgareTriticum dicoccoides28.6224.492.01338forward
CNT30459409Hordeum vulgareSaccharum spontaneum12.0240.1185.21142forward
CNT30688313Hordeum vulgareTriticum urartu26.5933.3791.08314forward

Expression of CNT30226134

Peptides detected in this lncRNA

>peptide 1 (36 aa)
FAFASLRLFFPSPKNQLQAPAVASRQLPISLYYCSR*

>peptide 2 (51 aa)
MESSSARRSFTSRLLVLGPPLLPQPGVLGLGRAWPPACAEGLSYCMWWHQA*

>peptide 3 (50 aa)
MGLHNRDFLASCAVAVSSLLTPSARPQCEIGNLVRFFLLTSKSFFRCIKN*

>peptide 4 (38 aa)
MDDTLCQSLIKMRRCVIELIAQCTDTNHMFRLFVLIWA*

>peptide 5 (32 aa)
MRRGFELLHVVAPSMRQQLHYFQGSYKIYGSS*

>peptide 6 (32 aa)
MKPQIFVCCMWTKNKQINSCSRPSSCTLVVLF*

>peptide 7 (34 aa)
MEHFFTASPLHTLKRTHLKASPASLKLTFTDILN*

>peptide 8 (29 aa)
MPSFCDCIIYRAVPGKSICLISVFLPLIFT

Sequence

>CNT30226134
CTTCGCCTTCGCTTCGCTCCGACTTTTCTTTCCCTCGCCGAAAAACCAGCTCCAGGCTCCAGCAGTAGCCAGTAGGCAACTTCCAATTTCATTATACTAT
TGCTCCCGCTAGGGTTCCAGCCTCCTCCATGGAGTCCTCGTCCGCTCGTAGATCCTTCACCAGCCGCCTTTTAGTTTTAGGTCCGCCTCTCCTCCCGCAG
CCGGGAGTGCTTGGTCTTGGGCGCGCCTGGCCGCCTGCATGCGCCGAGGGTTTGAGTTATTGCATGTGGTGGCACCAAGCATGAGGCAACAACTGCATTA
CTTTCAAGGAAGTTACAAAATCTATGGGTCTTCATAATCGTGACTTTCTTGCAAGTTGTGCAGTTGCTGTCTCAAGCTTGCTGACTCCGTCTGCCAGACC
GCAATGTGAAATAGGAAATTTAGTCAGGTTCTTTCTCTTGACCAGCAAATCGTTTTTCAGATGCATTAAGAACTAGGTAAATACTGGAAACATGGACCCA
TGGAGCATTTCTTCACCGCGTCACCCCTCCACACCTTAAAAAGAACTCATTTGAAGGCTAGTCCAGCCTCCCTGAAACTTACATTCACAGACATTCTCAA
CTGAGATGAAGCCACAGATCTTTGTATGTTGTATGTGGACGAAGAACAAACAGATTAACTCTTGTTCACGTCCCTCCTCATGTACACTTGTAGTTCTATT
CTAGGATTTCAACTCTGCACTCCATCTGCATCCTGAATATTCAGAGTCTCAAATTTGCACAACTCTCGATTTGATTCAGTGAACAAGTCAATAAGATAGA
TTTTTGGTCGAGGATAGGTTGAATAGGTCTGTACTTGCTTAATGATGCTATTCTTTTGACTTTTGAGTATGGATGACACGCTGTGTCAGTCTTTGATCAA
AATGAGAAGATGCGTGATTGAACTCATTGCTCAATGCACTGACACCAATCACATGTTTAGGCTGTTTGTGCTCATTTGGGCATGATCAATGTACAGTGAA
AGTTTTGTGTCCCAACAACCCCCCTTCGAAAACATCTAGGCAGAAGCTAAAGCATACTGTGAGATGTAATGGAGAAATCTTGAAAGCAGCATGCCATCTT
TTTGTGATTGCATAATTTACAGGGCTGTTCCAGGCAAATCAATCTGTCTAATATCTGTTTTCCTTCCGTTAATTTTTACAT