Detailed information on CNT30225616


BLAST search results

BLAST vs Swiss-Prot:
sp|Q94FA5|METK4_BRAJU, E-value = 1e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712486Hordeum vulgareGlycine max56.0716.7384.33134forward
CNT3090332Hordeum vulgareSolanum tuberosum49.7918.3185.71119forward

Expression of CNT30225616

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MTKRPDGFRWKMVFSSRYFAGITGLMTCSLSSKLGGEHVAEGHQLRGLVGGVPEHDALVTSTD

>peptide 2 (55 aa)
DDLAAGETGIAVRATDDKAARWVQVEDGVLIEVLCGDHWLDDMLLELQAWWRARG*

Sequence

>CNT30225616
ATGATGATCTTGCGGCCGGTGAGACCGGCATCGCCGTGAGGGCCACCGATGACAAAGCGGCCCGATGGGTTCAGGTGGAAGATGGTGTTCTCATCGAGGT
ACTTTGCGGGGATCACTGGCTTGATGACATGCTCCTTGAGCTCCAAGCTTGGTGGCGAGCACGTGGCTGAGGGGCATCAGCTCAGGGGTCTCGTCGGTGG
CGTACCCGAACATGATGCCCTGGTCACCAGCACCGACCT