Detailed information on CNT30221656


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520470Hordeum vulgareSetaria italica41.39.2291.18102forward
CNT30554409Hordeum vulgareOryza glaberrima35.636.2789.7788forward
CNT30362971Hordeum vulgareSorghum bicolor37.257.9190.2292forward

Expression of CNT30221656

Peptides detected in this lncRNA

>peptide 1 (81 aa)
TSFIASVIFCVLRTESMRLRRSRREHRTTRLLPAEAEKGERMGGRERFWIGFGWRSEQVGFSSRAEWWRASHCEIATDHVAR

>peptide 2 (56 aa)
HQLHRLRDLLRVADRVDAVAEVPEGAPHHQAAAGGGGERRKDGREGKILDWVWVEK*

Sequence

>CNT30221656
CACCAGCTTCATCGCCTCCGTGATCTTCTGCGTGTTGCGGACAGAGTCGATGCGGTTGCGGAGGTCCCGGAGGGAGCACCGCACCACCAGGCTGCTGCCG
GCGGAGGCGGAGAAAGGAGAAAGGATGGGAGGGAGGGAAAGATTTTGGATTGGGTTTGGGTGGAGAAGTGAGCAGGTGGGGTTTTCAAGCCGGGCTGAGT
GGTGGAGGGCTAGTCACTGCGAGATTGCCACGGATCATGTGGCGCGC