Detailed information on CNT30221499


BLAST search results

BLAST vs Swiss-Prot:
sp|P16147|PERX_LUPPO, E-value = 1e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694715Hordeum vulgareOryza sativa61.1717.9385.39178forward
CNT30672255Hordeum vulgareSetaria viridis72.1649.7686.67210forward
CNT30180112Hordeum vulgareSecale cereale95.8828.193.19279forward
CNT30386567Hordeum vulgareTriticum turgidum41.2433.7193.33120forward
CNT30554321Hordeum vulgareOryza glaberrima40.8924.4982.35119forward
CNT30659540Hordeum vulgareTriticum dicoccoides57.7347.0684.52168forward
CNT30680601Hordeum vulgareTriticum urartu45.3637.9384.85132forward
CNT30596630Hordeum vulgareOryza meridionalis94.8535.9484.06276forward
CNT30370682Hordeum vulgareOryza glumipatula92.133.1784.33268forward
CNT30102748Hordeum vulgareOryza rufipogon93.1335.4283.39271forward
CNT30577207Hordeum vulgareOryza barthii95.8831.9284.95279forward
CNT30117210Hordeum vulgareOryza nivara92.138.7383.21268forward
CNT30604331Hordeum vulgareOryza punctata95.8840.4984.23279forward

Expression of CNT30221499

Peptides detected in this lncRNA

>peptide 1 (52 aa)
GAMLPILIMAVVKALLNAAGLDAKFRTVLSVVSLLNSTWSECRSPFWDMRLV*

>peptide 2 (67 aa)
RDVAHLDHGRREGAAERRRVGRKVPDGVVGGVVVEQHLVRVQEPLLGHEVGVVGVVEPVGRGRVEVR*

Sequence

>CNT30221499
GGCGCGATGTTGCCCATCTTGATCATGGCCGTCGTGAAGGCGCTGCTGAACGCCGCCGGGTTGGACGCAAAGTTCCGGACGGTGTTGTCGGTGGTGTCGT
TGTTGAACAGCACCTGGTCCGAGTGCAGGAGCCCCTTCTGGGACATGAGGTTGGTGTAGTAGGCGTTGTCGAACCCGTTGGGCGTGGTCGTGTCGAGGTT
CGCTAGGTTGCCGTCGCCGGAGCCGGTTGTCTGTGGGCAGTTGGCCTTGAGCGACGTCGCGAAGGCGGCGTTGATGTTGCTGTAGTAGGCG