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Detailed information on CNT30220737


BLAST search results

BLAST vs Swiss-Prot:
sp|O81211|RBOHE_ARATH, E-value = 2e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693577Hordeum vulgareOryza sativa41.7661.1588.41233forward
CNT30101878Hordeum vulgareOryza rufipogon41.7654.3188.41233forward
CNT30574959Hordeum vulgareOryza barthii17.230.1989.5896forward

Expression of CNT30220737

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MYTQVVVSRCRGDGEGMPVNIEEILKPKALESS*

>peptide 2 (38 aa)
RRQYPNHFSHVEATEPWQSELTSHLLPHTHWLGDPSVC*

>peptide 3 (42 aa)
MAIRADLASPSSYTLVRRSFSMLMKGVAPIPRPIRKRMSYFL*

Sequence

>CNT30220737
GCCGGAGACAATATCCAAACCATTTTTCGCATGTTGAAGCGACTGAACCATGGCAATCAGAGCTGACCTCGCATCTCCTTCCTCATACACACTGGTTAGG
AGATCCTTCAGTATGCTGATGAAAGGAGTTGCACCAATTCCAAGGCCAATAAGAAAAAGGATGTCGTATTTCTTGTAATTTTGAGCTGGTGCACCGAAAG
GGCCATCAACAAAGATCTTGGGGAATCTAAATGAAGAAAGCCAAGTCACCAAGGTTCCTTAGTTCTGTTGTCCAGTCACCTAATGTGCGGATATGTACAC
TCAAGTAGTCGTCTCCAGGTGCAGAGGTGATGGAGAAGGGATGCCTGTAAACATTGAAGAAATTTTGAAGCCAAAAGCCTTGGAAAGCTCGTGACTTGGA
AAATATGGATGATGGGATGGTACCATTCAAAAGGCGAAACGTCTGGGCATTTTACAAAGAGGATCTATAGCTTACCTTGATGACGGTCACTCCATAATTC
TTCTCACGGACTCTTCTGGTAGCTCTCTCGCTGGCATAGAAGATAACAGGAACCGCTA