Detailed information on CNT30214822


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30281064Helianthus annuusChenopodium quinoa32.825.3284.8886forward
CNT30492279Helianthus annuusOlea europaea31.6814.1487.9583forward
CNT30168069Helianthus annuusPistacia vera29.3916.4990.9177reverse complement
CNT30371516Helianthus annuusOryza glumipatula24.4315.587.564forward
CNT30102715Helianthus annuusOryza rufipogon23.664.1490.3262forward
CNT30117170Helianthus annuusOryza nivara23.6614.2590.3262forward
CNT3049954Helianthus annuusCucumis sativus20.2310.1988.6853forward

Expression of CNT30214822

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MSLRAQICSSPMADITLTTKSFPSANPSF

Sequence

>CNT30214822
GCTAGAGGAATTCAAAGTACAGGAAACCAGTAAAATGCACCTGCTCAGAGCCCAAATGGACCAATCATAATAGTGCAGAAAAAAAAAATGATAGTATTAC
AACAGAAAAAAATATCTGCTTATATCACAACAGTTTTCTTTCAAATAAATTATAACAGAATTATTTAGGGCCAATGTCCTTGAGAGCACAGATCTGCTCC
TCTCCCATGGCTGACATCACACTCACAACCAAATCTTTCCCCTCTGCAAATCCATCTTTTAT