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Detailed information on CNT30209073


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30562839Helianthus annuusActinidia chinensis39.4328.7880.66181forward
CNT30360641Helianthus annuusLactuca sativa27.8925.5586.72128forward

Expression of CNT30209073

Peptides detected in this lncRNA

>peptide 1 (81 aa)
LECIIAASIITSSRWVKVVRSTVCASFRDRNLNLLGCFPCTQPHHMSQNITNNTTKYYEFKPMLRINGANRRTLHGLWHPC*

>peptide 2 (59 aa)
MELTVELSTAYGIPVSIPKCRLTGLSSHSLVLEPTCIRTLEACQLLSWVVQMLVALPSS*

>peptide 3 (50 aa)
MYPYSRSLSIVILGCSNVGGPSLELTSFFPIESTPTPEIHFLTSSSYTLAL

Sequence

>CNT30209073
TTTAGAATGTATAATTGCAGCTTCCATCATCACTTCTAGCCGTTGGGTCAAAGTTGTCCGCAGTACGGTCTGTGCATCCTTCAGGGACCGGAACCTGAAC
CTGTTGGGCTGCTTTCCCTGCACTCAACCACACCACATGAGCCAAAACATTACAAACAACACTACAAAATATTATGAATTCAAACCCATGCTAAGGATCA
ATGGAGCTAACCGTAGAACTCTCCACGGCTTATGGCATCCCTGTTAGCATCCCCAAGTGTCGGCTAACTGGACTCTCTTCACATTCTCTTGTTCTTGAAC
CAACATGTATCCGTACTCTAGAAGCTTGTCAATTGTTATCTTGGGTTGTTCAAATGTTGGTGGCCCTTCCCTCGAGTTGACAAGCTTCTTCCCGATTGAG
TCGACCCCAACGCCTGAAATCCACTTCCTTACTTCATCGTCATACACTCTAGCCCTCAA