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Detailed information on CNT30205622


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000269, E-value = 2e-22

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674589Helianthus annuusSetaria viridis27.4131.989.1974forward
CNT30523103Helianthus annuusSetaria italica27.4110.9589.1974forward
CNT30315505Helianthus annuusCorylus avellana66.339.1785.47179forward
CNT30518203Helianthus annuusJuglans regia66.320.0984.36179forward
CNT30702570Helianthus annuusQuercus lobata91.8549.684.68248forward
CNT30375451Helianthus annuusArabidopsis thaliana23.3325.393.6563forward
CNT30618877Helianthus annuusSesamum indicum72.9625.0382.74197forward
CNT3072234Helianthus annuusQuercus suber29.6312.787.580forward
CNT30379530Helianthus annuusManihot esculenta94.8144.9980.47256forward
CNT30526608Helianthus annuusPhaseolus vulgaris95.1931.7779.77257forward
CNT30632073Helianthus annuusVigna unguiculata95.1934.1879.77257forward
CNT30200086Helianthus annuusPisum sativum95.1948.2280.54257forward
CNT30163366Helianthus annuusPistacia vera94.0737.380.31254forward
CNT3094085Helianthus annuusSolanum tuberosum45.1924.1686.07122forward
CNT30179138Helianthus annuusSecale cereale27.419.1790.5474forward
CNT30307773Helianthus annuusTriticum aestivum28.1511.6490.7976forward
CNT30220711Helianthus annuusHordeum vulgare27.417.1489.1974forward
CNT30383318Helianthus annuusTriticum turgidum28.158.2790.7976forward
CNT30565715Helianthus annuusActinidia chinensis45.1915.5489.34122forward
CNT30586986Helianthus annuusMusa acuminata24.4418.6490.9166forward
CNT3086649Helianthus annuusVigna radiata36.313.1482.6598forward
CNT30510004Helianthus annuusSolanum lycopersicum44.8139.6782.64121forward
CNT30553215Helianthus annuusOryza glaberrima28.1512.9390.7976forward
CNT30171046Helianthus annuusTrifolium pratense37.4128.4588.12101forward
CNT30443203Helianthus annuusAegilops tauschii35.1914.4888.4295forward
CNT30246240Helianthus annuusAvena sativa23.713.3193.7564forward
CNT30668428Helianthus annuusTriticum dicoccoides27.4113.2491.8974forward
CNT30597299Helianthus annuusFraxinus excelsior72.9635.8885.79197forward
CNT30451774Helianthus annuusSaccharum spontaneum28.528.7387.0177forward
CNT30136307Helianthus annuusLolium perenne22.9610.4488.7162forward
CNT303693Helianthus annuusZea mays27.4121.4591.8974forward
CNT30610418Helianthus annuusGossypium raimondii95.1926.7282.1257forward
CNT30231835Helianthus annuusAnanas comosus32.2213.3885.0687forward
CNT30129800Helianthus annuusCorymbia citriodora45.1915.1686.89122forward
CNT30684878Helianthus annuusTriticum urartu27.418.1990.5474forward
CNT30722585Helianthus annuusTriticum spelta27.4110.190.5474forward
CNT30346527Helianthus annuusEragrostis tef19.6325.1288.6853forward
CNT30363871Helianthus annuusSorghum bicolor27.7821.4389.3375forward
CNT30619778Helianthus annuusCajanus cajan45.1918.4388.52122forward
CNT30596761Helianthus annuusOryza meridionalis28.159.6288.1676forward
CNT30360275Helianthus annuusLactuca sativa95.1957.4985.6257forward
CNT30369782Helianthus annuusOryza glumipatula28.1511.9389.4776forward
CNT30429187Helianthus annuusPapaver somniferum29.637.6887.580forward
CNT30570929Helianthus annuusVitis vinifera95.1938.384.05257forward
CNT3052765Helianthus annuusAmborella trichopoda42.9622.8382.76116forward
CNT30108786Helianthus annuusOryza longistaminata28.152.2590.7976forward
CNT3024639Helianthus annuusPopulus trichocarpa95.1962.3879.38257forward
CNT30327286Helianthus annuusAsparagus officinalis35.9310.7386.697forward
CNT30101075Helianthus annuusOryza rufipogon28.1510.8490.7976forward
CNT30576366Helianthus annuusOryza barthii27.7814.3186.6775forward
CNT30496069Helianthus annuusDigitaria exilis27.419.2786.4974forward
CNT30174435Helianthus annuusVigna angularis44.0717.7684.03119forward
CNT30557628Helianthus annuusPanicum hallii22.9611.1388.7162forward
CNT30724478Helianthus annuusLupinus angustifolius27.4112.2785.1474forward
CNT3065708Helianthus annuusSelaginella moellendorffii37.7829.3982.35102forward
CNT30114697Helianthus annuusEutrema salsugineum96.342.4183.85260forward

Expression of CNT30205622

Peptides detected in this lncRNA

>peptide 1 (86 aa)
VHDPHSFARDSDIRMHLFQHLEDVDLIRLNALLRSLLLLVRCTCSGFFREFLPGFWLLLRRCFLGCRSFLLLCRFLLGRLLLCLWG*

Sequence

>CNT30205622
CTGTTCATGATCCCCATAGCTTTGCTCGAGATTCCGATATCCGGATGCACCTGTTTCAGCACCTTGAAGATGTAGATCTTATACGTCTCAACGCTCTTCT
TCGTTCGCTTCTTCTTCTTGTCCGTTGCACCTGCTCCGGCTTCTTTCGGGAGTTTCTTCCCGGCTTTTGGCTTCTTCTCCGCCGGTGCTTTCTCGGCTGC
CGGAGTTTTCTTCTCCTCTGCCGGTTTCTTCTCGGCCGGCTTCTTCTCTGCCTTTGGGGCTGAAACAGGA