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Detailed information on CNT30196946


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 1e-47

BLAST vs NONCODE:
NONGMAT000508, E-value = 1e-44

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673219Pisum sativumSetaria viridis20.6733.4181.08148forward
CNT30523218Pisum sativumSetaria italica19.9726.1981.12143forward
CNT30546681Pisum sativumIpomoea triloba41.262.7780.68295forward
CNT30703567Pisum sativumQuercus lobata41.3458.6185.14296forward
CNT3069058Pisum sativumQuercus suber41.3433.8385.81296forward
CNT30186872Pisum sativumSecale cereale19.5528.0682.86140forward
CNT30301657Pisum sativumTriticum aestivum18.7228.7683.58134forward
CNT30219776Pisum sativumHordeum vulgare19.9733.9782.52143forward
CNT30397255Pisum sativumTriticum turgidum19.9729.4883.22143forward
CNT3086283Pisum sativumVigna radiata45.9522.1488.15329forward
CNT30439225Pisum sativumAegilops tauschii19.9749.3183.22143forward
CNT30244338Pisum sativumAvena sativa19.5525.2382.86140forward
CNT30664208Pisum sativumTriticum dicoccoides19.5527.8381.43140forward
CNT30444399Pisum sativumSaccharum spontaneum20.3924.581.51146forward
CNT30135649Pisum sativumLolium perenne19.9727.8881.82143forward
CNT30679687Pisum sativumTriticum urartu19.9723.6481.12143forward
CNT30348363Pisum sativumEragrostis tef19.9725.6780.42143forward
CNT30620798Pisum sativumCajanus cajan24.333.3386.78174forward
CNT30327358Pisum sativumAsparagus officinalis17.1828.9482.93123forward
CNT30331117Pisum sativumDioscorea rotundata20.1115.2183.33144forward
CNT30496126Pisum sativumDigitaria exilis19.9721.0380.42143forward

Expression of CNT30196946

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLSLRTLRCRLAPPFPRPFPPLPLPDMAAIS*

Sequence

>CNT30196946
TTTTCACTTGAACTTCAGAGTCATAATTTGATTTGTATAATATATGAAGACTTCACAACTTCCTAAAGATTTGGCTTTATTCAGTTGAACTTCATTACAG
CAAACAAAACGTATTCAATCTAAAAAGTATGTATCCAATTAGGCTTTATAATTCCAAATAAGCACCACAAAATTAACAACTACTCACAACATAGAAATGG
ATCAGTCAAAGATTGAAATTTCAAATCGTCAATTAATACATCAAAAGTTATGCGAAAACAAATATTGATGCTAAACATAAAGTACAATTACACAATATAC
ACCAACTTTAAGATTCGAATTACATGAAACCCTAATTGATAAAGCCATCCCCAATTTTCTAACCGCCGAATCCGTAGAGAGTCCTTCCCTGTCTCTTGAG
AGCGTAAACAACATCCATCGCAGTAACAGTCTTACGGCGAGCATGCTCGGTGTAGGTCACAGCATCGCGAATCACGTTCTCAAGAAAGATCTTGAGAACA
CCGCGAGTTTCTTCATAAATTAGACCGCTGATACGTTTCACGCCACCACGTCTTGCGAGACGACGAATAGCAGGCTTTGTTATTCCCTGAATGTTATCTC
TGAGAACCTTACGGTGTCGTTTGGCTCCTCCCTTTCCAAGACCCTTTCCTCCTTTGCCTCTTCCTGACATGGCTGCGATTTCTTGAGCTTTTTCTCACTC
TTTGCGTTGAACTGTG