« Back to Pisum sativum search


Detailed information on CNT30196808


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30371585Pisum sativumArabidopsis thaliana28.6917.3991.1868forward
CNT30268339Pisum sativumChenopodium quinoa32.079.3484.2176forward
CNT30381246Pisum sativumManihot esculenta26.167.6487.162forward
CNT30524716Pisum sativumPhaseolus vulgaris28.278.5692.5467forward
CNT30628639Pisum sativumVigna unguiculata31.2210.4185.1474forward
CNT30490066Pisum sativumOlea europaea21.15.619050forward
CNT30712487Pisum sativumGlycine max32.079.9689.4776forward
CNT3088037Pisum sativumVigna radiata34.66.190.2482forward
CNT30541340Pisum sativumBrassica napus51.0518.9183.47121forward
CNT30509382Pisum sativumSolanum lycopersicum28.6910.6494.1268forward
CNT30146657Pisum sativumMedicago truncatula57.8112.4991.97137forward
CNT3059480Pisum sativumArabidopsis lyrata22.3622.0890.5753forward
CNT30217937Pisum sativumKalanchoe fedtschenkoi32.0717.7286.8476forward
CNT30648504Pisum sativumRosa chinensis32.4910.5892.2177forward
CNT30622201Pisum sativumCajanus cajan28.2730.1889.5567forward
CNT30357505Pisum sativumLactuca sativa21.17.589050forward
CNT30572796Pisum sativumVitis vinifera31.2214.0286.4974forward
CNT30119382Pisum sativumCitrus clementina31.228.1486.4974forward
CNT30726265Pisum sativumLupinus angustifolius54.4319.3485.27129forward

Expression of CNT30196808

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MSPFPGAVMRTFLAPAVMRVLATMPTSQEVPSNSSKSIYGYLQLFCFHYKT

>peptide 2 (77 aa)
VSGARSIADNVVGVGVSISIDTNHISRDVSFSGGSDENLLSPCCNASPCDHANISRSSFQFFQIHLWLPSVVLLPLQD

Sequence

>CNT30196808
AGTTAGTGGTGCAAGAAGCATTGCTGATAATGTCGTCGGCGTGGGTGTAAGCATCAGCATTGACACCAACCACATAAGTAGGGATGTCTCCTTTTCCGGG
GGCAGTGATGAGAACCTTCTTAGCCCCTGCTGTAATGCGAGTCCTTGCGACCATGCCAACATCTCAAGAAGTTCCTTCCAATTCTTCCAAATCCATTTAT
GGCTACCTTCAGTTGTTTTGCTTCCACTACAAGACTT