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Detailed information on CNT30194853


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FFC0|H2B10_ARATH, E-value = 2e-55

BLAST vs NONCODE:
NONTPRT005013, E-value = 8e-111

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3094085Pisum sativumSolanum tuberosum35.652.8782.02267forward
CNT30510004Pisum sativumSolanum lycopersicum11.7328.8587.588forward
CNT30429187Pisum sativumPapaver somniferum34.6724.9589.23260forward

Expression of CNT30194853

Peptides detected in this lncRNA

>peptide 1 (40 aa)
LNRNSIELNVICTKLKPNRRNVHENVAHEHQMHKTSEPQI*

>peptide 2 (35 aa)
MNTKCIKQANPKYSQFHYSFKTQKIHQIQLYNLTS*

>peptide 3 (54 aa)
MLGQFSRKNKPNRSLNLPRSYRWLLVIPRKPRRFSSKLLKDIIDETVHYTHGLA*

Sequence

>CNT30194853
CCTGAATAGAAATTCGATCGAACTGAATGTGATTTGCACAAAGCTTAAACCAAACCGAAGAAATGTACATGAAAACGTAGCACATGAACACCAAATGCAT
AAAACAAGCGAACCCCAAATATAGTCAATTCCACTATTCTTTCAAAACACAAAAGATCCACCAGATTCAATTATACAACCTTACAAGTTAAACATTAATC
CTCTAAACAACAACTACACTGTAAAATCTCTAAACGCTAGTGAACTTGGTTACAGCTTTGGTACCCTCAGATACAGCATGCTTGGCCAATTCTCCAGGAA
GAACAAGCCTAACCGCAGTCTGAATCTCCCTCGAAGTTATCGTTGGCTTCTTGTTATACCTCGCAAGCCTCGAAGATTCAGCAGCAAGCTTCTCAAAGAT
ATCATTGATGAAACTGTTCATTATACCCATGGCCTTGCTTGAGATACCAATGTCAGGGTGAACTTGTTTCAGAACCTTGAAGATGTAGATCTTGTAGGTT
TCCACATTCTTCTTGTTTCTCTTCTTCTTCTTGTCTCCGGCAGCGGCGCCACCGTCCTTAGGTAGCTTCTTTCCGGCCTTTGGCTTCTTCTCGGCGGGAG
TCTTCTCGGCTATTGTGGATTTCTTCTCCTCTACAGGTTTCTTCTCAGCTGGTTTCTTCTCTCCTTTTGGTGCCATTTTTGTTTGGAAATTTGGAAATTG
GAATTTGAAAGAAGATGAAAGATGCAGATCGAACAAGTGCGAATGAGTAA