CANTATAdb - search

Detailed information on CNT30192307

BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XT99|AKR2_ORYSJ, E-value = 2e-60

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30692870	Secale cereale	Oryza sativa	39.51	58.27	83.02	324	forward
CNT30676378	Secale cereale	Setaria viridis	29.63	72.75	84.36	243	forward
CNT30703861	Secale cereale	Quercus lobata	9.39	30.08	87.01	77	forward
CNT30587122	Secale cereale	Musa acuminata	17.8	20.98	82.88	146	forward
CNT30472864	Secale cereale	Saccharum spontaneum	39.51	54.73	81.48	324	forward
CNT30133477	Secale cereale	Lolium perenne	22.8	92.57	94.12	187	forward

Expression of CNT30192307

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MLKLLGHEPDNMLKLDYDMAATCTPCHCRT*

>peptide 2 (79 aa)
MYAMPLPDLTCTASTHDVGSFIQRKTGNQGLASLFNTQLSKRTMEGSLNPSKYSSFEGIGHHGHHLRRHKTRVQPSPPV*

>peptide 3 (55 aa)
MDITCGGIRLEFSHLLRCEPHRQRSHILVQILYFCCARYRANIAPLMMNPGQCKL*

Sequence

>CNT30192307
GCCAGTGCGGGATTAACATAACATGGTTGGAAACCGCAAGAGCATAAACACAAGATGATTTTGTACAGCGTACAAACTTGCTGCTTTTCTCTATTAATTT
GTTTTGCAGAAGGAAACACAACATGCTCAAGCTGTTAGGCCATGAACCGGACAACATGCTCAAGCTAGATTACGACATGGCAGCGACATGTACGCCATGC
CACTGCCGGACTTGACGTGCACGGCATCCACACACGACGTGGGCTCGTTTATTCAACGGAAAACTGGAAATCAAGGGCTAGCTAGCTTATTCAACACTCA
ACTTTCCAAGAGGACAATGGAGGGGTCTCTGAATCCGTCCAAGTACTCATCATTTGAGGGTATCGGTCACCATGGACATCACCTGCGGCGGCATAAGACT
CGAGTTCAGCCATCTCCTCCGGTGTGAGCCTCACAGACAGCGCTCCCACATTCTGGTTCAAATTCTCTATTTTTGTTGTGCCAGGTATCGGGCAAACATC
GCTCCCCTGATGATGAACCCAGGCCAATGCAAGTTGTGATGGTGTGCACCCTTTTCTTGTTGCCATTGCGTTAACACTCTCAAATATCAGGGAATTCTTC
TCAAGATTCTCTGGTTGAAACCTAGGTAAAAGCTGCAATAGCAAAATATTGTGAGCGAAAGAGCCAACAGATCATAGAAGTTTCACTTCTCTTTTCAAGG
AAGAAACTTACAAGGCATTTTCTGTACAATTTTAAAATGTTTCTATACATTGAAAGATAAACATTTTCACAAAATATAAACATCATAATTAAGTTAGGTG
ATGGTAAATTTTTGTGTGGG