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Detailed information on CNT30192114

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30500052	Secale cereale	Coffea canephora	7.99	24.81	87.69	65	forward
CNT30370023	Secale cereale	Oryza glumipatula	17.44	58.2	88.03	142	forward
CNT30101518	Secale cereale	Oryza rufipogon	17.81	59.92	88.28	145	forward
CNT30603989	Secale cereale	Oryza punctata	20.39	76.15	89.16	166	forward

Expression of CNT30192114

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MPLPDSTCTASTQDVGSFIQRKTGNQGLASLFNTQLSKRTMEESQNPSKYSSFEGIGHHGHHLRRHKTRVRPSPPV*

>peptide 2 (45 aa)
MDITCGGIRLEFGHLRRCEPHRQRSHILVQFSIFVVPGMGQTSLP*

>peptide 3 (71 aa)
TNLLLFSINLFCRRKHNMLKLLGHEPDNMLKLDYDMAATCTPYATAGLNVHGIHTRRGLVYSTENRKSRAS*

>peptide 4 (31 aa)
MYAICHCRTQRARHPHKTWARLFNGKQEIKG*

Sequence

>CNT30192114
ACAAACCTGCTGCTTTTCTCTATTAATTTGTTTTGCAGAAGGAAACACAACATGCTCAAGCTGTTAGGCCACGAACCGGACAACATGCTCAAGCTAGATT
ACGACATGGCAGCGACATGTACGCCATATGCCACTGCCGGACTCAACGTGCACGGCATCCACACAAGACGTGGGCTCGTTTATTCAACGGAAAACAGGAA
ATCAAGGGCTAGCTAGTTTATTCAACACTCAACTTTCCAAGAGGACAATGGAGGAGTCTCAGAATCCTTCCAAGTACTCATCATTTGAGGGTATCGGTCA
CCATGGACATCACCTGCGGCGGCATAAGACTCGAGTTCGGCCATCTCCGCCGGTGTGAGCCTCACAGACAGCGCTCCCACATTCTGGTTCAATTCTCTAT
TTTTGTTGTGCCAGGTATGGGGCAAACATCGCTCCCCTGATGATGAACCCAGGCCAATGCAAGTTGTGATGGTGTGCACCCTTTTCTTGTTGCCATTGCG
TTAACACTCTCAAATATCAGGGAATTCTTCTCAAGATTCTCTGGTTGAAACCTAGGTAAAAGCTGCAATAGCAAAACATTGTGAGCGAAAAGCCAACAGA
GCATAGAAGTTTCACTTCTCTTTTCAAGGAAGAAACTTACAAGGCATTTTCTGTACAATTTTAAAATGTTTCTATACAATTGAAAGATGAACATTTTCAC
AAAATATAAACATCATAATTAAGTTAGGTGATGGTAGATTTTTGTGTGGGAAAGACGATGGTGGATTTAGAAGCCAAAGGATAATAAATAATCAATCAGC
CACCAGAAGAACAA