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Detailed information on CNT30178931


BLAST search results

BLAST vs Swiss-Prot:
sp|P16147|PERX_LUPPO, E-value = 3e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672255Secale cerealeSetaria viridis37.0155.6988.09235forward
CNT30348949Secale cerealeEragrostis tef16.695087.74106forward
CNT30117210Secale cerealeOryza nivara42.5239.0285.93270forward
CNT30604331Secale cerealeOryza punctata42.5239.1987.41270forward

Expression of CNT30178931

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MLPILIMAVVKALLKAAALDAKLRTVLSVVSLLKSTWSECRSPFCDRRLV*

>peptide 2 (49 aa)
IYLPFYFTVCTSVSRTDSSSPCPRHAKCQKRSLYLIMYVGLIAVLHAFA*

>peptide 3 (40 aa)
MPTSCQMSKEKFISHYVCRIDSSSPCLCMRKWESDRYIYM*

Sequence

>CNT30178931
CATCTACTTGCCATTTTACTTCACTGTGTGTACAAGTGTAAGTAGGACTGATAGTAGTTCTCCATGCCCACGTCATGCCAAATGTCAAAAGAGAAGTTTA
TATCTCATTATGTATGTAGGATTGATAGCAGTTCTCCATGCCTTTGCATGAGAAAGTGGGAATCCGATCGTTACATATATATGTAGACGCATGCATGATT
TGATGCTGCTCGTACATAAAATACACGTTTCCAAGTGCTGGTATTTATATTGACCACTGTTCTGTGGCCTTATTCATTCACGTGTCGTGCTTGCGAACGC
TGCCGACAGCTAGTAGGTAGTAGCTCGTCCGTCAATCACGAGTTCACCCTGGAGCAGCTGAGCCTGATCTGGCCCTGCGTCCCCGTCTTGGGCGCGATGT
TGCCCATCTTGATCATGGCCGTCGTGAAGGCGCTGCTGAAGGCCGCCGCGTTGGATGCAAAGTTGCGGACGGTGTTGTCAGTGGTGTCGTTGTTGAAGAG
CACCTGGTCCGAGTGCAGGAGCCCCTTCTGTGACAGGAGGTTGGTGTAGTAGGCGTTGTCGAACGCGTTGGGCGTCGCCGTGTCCAGCGGCGCCAGGCTG
CTGTCGCCGCCGGACTGGGGGCAGTTGGCCTTGAG