CANTATAdb - search

Detailed information on CNT30174695

BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-147

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30238962	Vigna angularis	Brassica oleracea	84.84	45.73	83.6	884	forward
CNT30622816	Vigna angularis	Daucus carota	85.41	47.34	85.17	890	forward
CNT30722465	Vigna angularis	Triticum spelta	77.16	71.21	85.7	804	forward
CNT30100520	Vigna angularis	Oryza rufipogon	63.44	66.63	86.84	661	forward
CNT30111771	Vigna angularis	Ficus carica	85.41	71.43	85.17	890	forward
CNT3050995	Vigna angularis	Cucumis sativus	77.35	72.42	86.85	806	forward

Expression of CNT30174695

Peptides detected in this lncRNA

>peptide 1 (36 aa)
IYLKFHYNKGTIQSNTNQIYLRVNKDPIHSPILKMS*

>peptide 2 (37 aa)
MRRCWSGGIPSLSWILAFTLSIVSELSTSRVMVFPVRV

>peptide 3 (31 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTR*

>peptide 4 (31 aa)
MVSELSTSRVMVLPVRVFTKICMPPRRRRTR*

>peptide 5 (31 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTR*

Sequence

>CNT30174695
ATATATCTAAAGTTTCATTATAACAAAGGGACAATACAGTCCAACACAAACCAAATTTATTTAAGGGTCAATAAAGACCCAATCCACAGTCCGATTTTGA
AGATGTCTTGAAAGCAGTAAAAAACAGAGGTCAGCACAGTCTAAAAGCCCCCACGAAGACGCAGAACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTA
ATCAGCAAGGGTCCTTCCATCCTCCAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACG
TTGTCGATGGTGTCAGAGCTCTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCATGCCACCGCGGAGACGGAGAACAAGGT
GAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCC
CTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATCTGC
ATGCCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGTTTTCCAGCGAAGA
TCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTTACGTTGTCGATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTT
TCCGGTGAGAGTCTTGACAAAGATCTGCATGCCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGG
CCATCCTCGAGCTGTTTTCCAGCGAAGATGAGACGTTGCTGGTCAGGGGGAATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTATCGG
AGCTCTCGACCTCGAGAGTGATGGTCTTTCCGGTAAGGGTCT