Detailed information on CNT30170363


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378674Pistacia veraArabidopsis thaliana24.373.2394.1268reverse complement
CNT30176977Pistacia veraSecale cereale22.5815.3793.6563reverse complement
CNT30226414Pistacia veraHordeum vulgare21.154.1289.8359reverse complement
CNT30592658Pistacia veraMusa acuminata22.582.8890.4863reverse complement

Expression of CNT30170363

Peptides detected in this lncRNA

>peptide 1 (30 aa)
DRNPSLYSFSYLSKNTKQDCKIESIIEYAG*

Sequence

>CNT30170363
GATCGTAATCCATCTCTTTATTCCTTTAGTTATCTATCTAAAAATACTAAACAAGATTGTAAAATAGAATCAATCATTGAATATGCAGGCTAGAAAGATG
GTTAGACTTTGGTTTTGGCAACCACCGTAGGAGGTGTGATGTACATGTGGACCGCCCATTTCAATTGTTGTGCTTTCTTAAATTGCATAGCGTTCCTGAC
TTTCTGGAGTTATAACATTTGAATTTCTCTTACATTCCACGTTCCCGAAACGGATCCTATCAAATATTTCACATTTTCT