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Detailed information on CNT30169907


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 3e-154

BLAST vs NONCODE:
NONTPRT002153, E-value = 8e-97

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30528694Pistacia veraEucalyptus grandis50.2262.0787.57684forward

Expression of CNT30169907

Peptides detected in this lncRNA

>peptide 1 (60 aa)
RSDGRKHIFIDRITTKPLLPRKHCTLDLTAIREPNRITLSADELYLHTSPTKNTVELPNR*

>peptide 2 (40 aa)
MVSELSTSRVMVLPVRVLTKICMPPRRRRTRWRVDSFWML*

Sequence

>CNT30169907
AAGATCCGATGGGAGGAAGCACATTTTTATAGATAGAATCACGACAAAGCCCTTGCTGCCTAGGAAGCACTGCACACTTGACTTGACAGCAATCAGAGAA
CCAAATAGAATTACACTCAGCGCAGATGAACTATACCTTCATACGTCCCCCACAAAGAATACAGTAGAGCTACCCAACAGATAGAAGGGTTTTCTTCATC
TTCCGTATTCAAATCAATACACTTCAACTTCACTTATAATATCAAGTTATCAACCAACACAAGATTAAAACACTTTTTAACTGAACCGTTCAACCGAGAA
ACTATTATTATTATTCCAAAGCAAAGAAAAACACAAGACAAAGACAGCTATTAAATAACGGAAACGAAACTGAAACTGGTCTCAACTTCATGACCAGGAA
ATACTGGTAAACTCCAGACAGACACACAGACAGACAGGCAGAGAAACCACACCACCACCATCCAATTTTCACTTAGAATTCACCACCACGAAGACGGAGG
ACAAGGTGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAGGGTTCGTCCGTCTTCTAATTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCCGGTG
GAATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTATCGATGGTGTCGGAGCTCTCCACCTCGAGAGTGATGGTCTTACCGGTGAGAGTCTTGACAAA
GATCTGCATGCCTCCACGGAGACGGAGGACAAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGCTTTCCG
GCGAAGATCAAACGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCGATCGTGTCAGAACTCTCGACCTCAAGAGTGA
TAGTCTTGCCGGTGAGAGTCTTAACGAAGATCTGCATGCCTCCACGGAGACGGAGGACAAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGCCAA
AGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCCGGTGGGATCCCTTCCTTGTCTTGAATCTTGGCCTTGACGTTATCGATT
GTATCGGAACTCTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCATGTTGAGAAGATTGTTGTTGAAACTTGAAATAGAGA
AATAGAGGATTGCTAGAATAGAATTGTGAAGAAGAAAGGGGGAGGAAGGGTGTTTATATAAGAGAAAATGCCGACTTGGTGAAGGTTTCGAAGAGAACGC
CAATGCGTACTAGAAGGGAAAGGAGTGGTCCAGATGAGTTGGTTTAAAGTTTGCTTACGTAA