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Detailed information on CNT30163276


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39196|PIP14_ARATH, E-value = 3e-53

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691492Pistacia veraOryza sativa28.5711.5985.2388forward
CNT30640394Pistacia veraNymphaea colorata24.6815.286.8476forward
CNT30549105Pistacia veraIpomoea triloba28.915.6487.6489forward
CNT30515171Pistacia veraJuglans regia31.4910.2887.6397forward
CNT3020673Pistacia veraCitrullus lanatus40.5811.7688.8125forward
CNT30728378Pistacia veraCorchorus capsularis36.698.9985.84113forward
CNT30404919Pistacia veraBeta vulgaris26.6213.191.4682forward
CNT30525480Pistacia veraPhaseolus vulgaris41.235.9483.46127forward
CNT30631135Pistacia veraVigna unguiculata32.478.5287100forward
CNT30502187Pistacia veraNicotiana attenuata40.913.4784.92126forward
CNT30711465Pistacia veraGlycine max34.4222.788.68106forward
CNT3044720Pistacia veraPrunus dulcis26.9512.5989.1683forward
CNT30288667Pistacia veraTriticum aestivum39.6115.885.25122forward
CNT30224613Pistacia veraHordeum vulgare32.7937.2784.16101forward
CNT30394052Pistacia veraTriticum turgidum28.96.2283.1589forward
CNT30560771Pistacia veraActinidia chinensis40.5816.4384125forward
CNT30590280Pistacia veraMusa acuminata38.6422.9383.19119forward
CNT3085478Pistacia veraVigna radiata27.614.8688.2485forward
CNT30435838Pistacia veraAegilops tauschii16.2320.089250forward
CNT30658930Pistacia veraTriticum dicoccoides37.3448.1284.35115forward
CNT30261241Pistacia veraBrassica rapa26.9522.885.5483forward
CNT30613102Pistacia veraArabis alpina24.0328.4687.8474forward
CNT30599410Pistacia veraFraxinus excelsior30.8414.3383.1695forward
CNT30227661Pistacia veraAnanas comosus39.6153.5186.89122forward
CNT30213185Pistacia veraHelianthus annuus20.1311.2187.162forward
CNT30623024Pistacia veraDaucus carota39.2936.3483.47121forward
CNT30680173Pistacia veraTriticum urartu16.2320.589250forward
CNT30427269Pistacia veraPapaver somniferum24.3528.38875forward
CNT30704968Pistacia veraPrunus avium41.2314.0884.25127forward
CNT3054194Pistacia veraAmborella trichopoda38.642.0985.71119forward
CNT3024497Pistacia veraPopulus trichocarpa33.7737.0188.46104forward
CNT30118191Pistacia veraCitrus clementina33.449.9188.35103forward
CNT3038708Pistacia veraCucumis melo29.87791.392forward
CNT30603734Pistacia veraOryza punctata39.619.2984.43122forward
CNT30112149Pistacia veraFicus carica39.6115.5488.52122forward
CNT3050457Pistacia veraCucumis sativus29.871691.392forward

Expression of CNT30163276

Peptides detected in this lncRNA

>peptide 1 (82 aa)
VVIPGVFSVEDDGGTKTPSRVDTSSSDWNGSQVNQEDSKTNGQRVSSTTQQLVSGCSFKTLHHTSTADGTKALHHHVENCPS*

>peptide 2 (36 aa)
MGKELAPPPNNWYLVAPSKPFTTPAPQMAPRHCITM*

>peptide 3 (32 aa)
WSSQACSLLKMMAAPRLLAGLIPVPVIGMVAK*

Sequence

>CNT30163276
GTGGTCATCCCAGGCGTGTTCTCTGTTGAAGATGATGGCGGCACCAAGACTCCTAGCAGGGTTGATACCAGTTCCAGTGATTGGAATGGTAGCCAAGTGA
ACCAAGAAGACAGCAAAACCAATGGGCAAAGAGTTAGCTCCACCACCCAACAACTGGTATCTGGTTGCTCCTTCAAAACCCTTCACCACACCAGCACCGC
AGATGGCACCAAGGCACTGCATCACCATGTAGAAAACTGCCCTAGTTAAAGACAGCTTCCTCGCCAAAAATAGCCCGAATGTCACCGCCGGGTTGATGTG
TCCCCCTG