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Detailed information on CNT30161291


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000736, E-value = 2e-60

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30585947Pistacia veraMusa acuminata28.323.788.68371forward
CNT30104644Pistacia veraOryza rufipogon24.9637.5989.91327reverse complement
CNT30333557Pistacia veraCynara cardunculus10.2330.0483.58134forward

Expression of CNT30161291

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MTSRMERDSNPRYSYQYFGFQDRLFQPLRHPSPSRFARPIYPRAGG*

>peptide 2 (44 aa)
SCTKAEAASALYLTTLWQIDTIKSLLYHTKASPAERFFKTTAPG*

>peptide 3 (50 aa)
MGLPKENYNRSLSTTHKTTEIFDLAPEGNPPGPSPTYTRGAEDNERETKS*

Sequence

>CNT30161291
CATCCTGCACAAAAGCTGAGGCTGCCAGCGCATTGTATCTAACCACACTGTGGCAAATCGATACAATAAAAAGCTTGCTATACCATACAAAGGCATCTCC
GGCCGAACGGTTTTTCAAGACTACGGCGCCTGGGTAAAGATCCCGTTTACCAAACAAGACGTCGAGAGTTTCACTTAACCATTCCCCTCCTGCAGCCAAA
GTGATAGCGGCTGTAGCATCCACCGGTAATGTGTGGAAGAGGGTAAGCTTTCTATGTGGATAGGACGTATCAACACCTTTTGCATCTTTTAAAGGAAATA
TCTAAGAATTGTGTTGGGTCCTGAGGACCAGGATGGCCGAAGATCAAAACCGAAATGTGCCAGGGGTTGATCATCGAAGCCAGGGCAATAACGATGAAGG
AATTTGAGCGCTGATGTAGCTAACAGCCACCTTCATAGTCGATTCATTAGGGTCATCACCTTCCACCCACTAGTGGAAATATCCACCGTTTTCTTTGTCT
GTTAAGCCTCACAGCTATGGGACTTCCTAAAGAAAACTACAATCGTAGTTTATCAACCACTCACAAGACCACCGAGATCTTCGACTTAGCTCCCGAAGGT
AATCCACCCGGCCCTTCCCCAACCTATACAAGGGGAGCGGAAGATAACGAAAGGGAGACAAAGTCCTAACTAAATCATAACACAAGCTACCCATTCCATC
TATCATATCAGTCGAGTCGATCCGATTCGTTCTTATCTATAGATAACAGATAACGCAAGAGAGAACTTATGACTTCGCGGATGGAGAGGGATTCGAACCC
CCGGTATTCCTATCAATACTTCGGTTTTCAAGACCGACTCTTTCAACCGCTCAGACATCCATCCCCTTCGCGCTTCGCCCGCCCTATCTATCCGCGCGCT
GGCGGGTAGGGGCTTATCTATGTGATTCGCTACGCTTGCTTGCGCCTATCGGCGGACTCTATTGCCTGCCGGTTAGGTTAGCGAAACTTTTCCGGTAGTA
CGAATCGCTACGCTTCGCTTCTTTCTATATGATAATATGCACCTTGGTTGCTGCGCTCCCTGCGGGTAATAGCAAGAGAGTGAAGAAAGAATGATCCTCC
AAAGAGTGATTGAGTCCGACTCAAGCGAGTGAGTGAAAGGCGTGGCAAGAGAGCGAGTTCGACTCGCGAACGATCAGCAAGTGAAGGACCGATCCTTTTG
CGCCAGTACTGTTGCGAGACTGGTACTTGGCGGCTCACGAGCAACATATAGACTAAGGTTGCCCATCACTCCCTCGCTCTTTTTTGAAGGCCCTTTCTAT
TCTCTTTCTT