Detailed information on CNT30154533


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534838Prunus persicaEucalyptus grandis32.5727.0883.92143forward
CNT30378612Prunus persicaArabidopsis thaliana29.1641.2985.16128forward
CNT3021436Prunus persicaCitrullus lanatus17.5423.9190.9177forward
CNT30157163Prunus persicaPistacia vera29.8429.8486.26131forward
CNT30562763Prunus persicaActinidia chinensis36.2234.6486.79159forward
CNT30146603Prunus persicaMedicago truncatula28.4732.9891.2125forward
CNT30128751Prunus persicaCorymbia citriodora23.6920.4389.42104forward
CNT30362074Prunus persicaSorghum bicolor31.2124.3386.13137forward
CNT30355760Prunus persicaLactuca sativa33.9422.3181.88149forward
CNT30706321Prunus persicaPrunus avium58.5446.5699.61257forward
CNT3026328Prunus persicaPopulus trichocarpa40.0933.3389.2176forward
CNT30113754Prunus persicaFicus carica41.6944.7483.61183forward

Expression of CNT30154533

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MCNSQFRPTYHNWFHCLVQELCSCLNCSL*

>peptide 2 (35 aa)
MRTQPNEGPFAIVTRSGCTMIAFSFLRRREYPTEL*

Sequence

>CNT30154533
CAGGAACAAAGATCCTGCGGTAGTTCTCATGAGCAGTGTTGTTGTGGTTGAGCTTCTTTGCTAGTGCTCTGAGGAAATCCTTCATGAGAACACAACCAAA
TGAAGGGCCATTTGCTATTGTCACACGATCGGGCTGCACGATGATTGCCTTCTCTTTCTTGAGAAGGAGAGAGTACCCAACAGAGCTGTAGTCATTGAAA
ATTGGTCCAGCAAACAAGTATGCATCTGCAGACTCCACAATCTCAGCACAAAAGGCATCACAGCCAGAGCATAACCACTGGCATCAGCTAGTTCAACAAA
GGCATCACCAGCATGTGCAACTCGCAGTTTAGGCCCACCTACCATAACTGGTTTCACTGCCTTGTTCAAGAACTCTGCAGCTGCCTCAACTGCAGCCTCT
AAGCCCCATTGATTGCTCAATCTGTACAACAAAACAAAT