Detailed information on CNT30151725


BLAST search results

BLAST vs Swiss-Prot:
sp|Q93VR4|ML423_ARATH, E-value = 5e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676593Brachypodium distachyonSetaria viridis35.7918.4489.22102forward
CNT30290212Brachypodium distachyonTriticum aestivum57.1971.8193.87163forward
CNT30244584Brachypodium distachyonAvena sativa58.2545.7393.37166forward
CNT30366141Brachypodium distachyonSorghum bicolor37.8915.5892.59108forward
CNT30101296Brachypodium distachyonOryza rufipogon57.1928.3596.32163forward

Expression of CNT30151725

Peptides detected in this lncRNA

>peptide 1 (94 aa)
GRDTHGRSSTMRVTRRRARRTVPADLPSPSTVSMLLYCSGKILGNSSVESRSAVHSLSAGDFTSTTSSTLDAIDQAIAARYDQKLLLLSWCACGS

>peptide 2 (80 aa)
QRHTWSQQHNESNTSTCKADGAGGLAVALDGLDALVLLGEDLGEQLRRITKRRPQLVRRGLHLHDKLNLGRHRSSDCCKI*

Sequence

>CNT30151725
GGCAGAGACACACATGGTCGCAGCAGCACAATGAGAGTAACACGTCGACGTGCAAGGCGGACGGTGCCGGCGGACTTGCCGTCGCCCTCGACGGTCTCGA
TGCTCTTGTACTGCTCGGGGAAGATCTTGGGGAACAGCTCCGTCGAATCACGAAGCGCCGTCCACAGCTTGTCCGCCGGGGACTTCACCTCCACGACAAG
CTCAACCTTGGACGCCATCGATCAAGCGATTGCTGCAAGATATGATCAAAAGCTCTTGCTACTGTCGTGGTGCGCTTGTGGCTCG