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Detailed information on CNT30149774


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30221423Brachypodium distachyonHordeum vulgare10.1333.8687.2186forward
CNT30659258Brachypodium distachyonTriticum dicoccoides10.2541.0489.6687forward
CNT30110710Brachypodium distachyonOryza longistaminata13.3125.6283.19113forward
CNT30117646Brachypodium distachyonOryza nivara26.2723.3879.37223forward

Expression of CNT30149774

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MVNDVFLEGHEVPSSIGGCGGRVIVRLGMRFGF*

>peptide 2 (46 aa)
MKTRTQLHNLINKHPHVPDTHLSSLFFSLSRKTVILERLINKRRWK*

>peptide 3 (61 aa)
MMYFLMGSHNVADAHSADGYWVFPPTTPNVSSESGTILDGSCPGHGALLAALWSWARQSAPW

>peptide 4 (64 aa)
MVNDVFLDGLAQCRRRTLRRWVLGLSSDNTKCVLRKRHDLRWLLPGARRVVGRAVELGEAVGAME

>peptide 5 (71 aa)
MMKDRRIQSSMQLIYSSGPCMVSAEPEGGRWAWGVLLHRWAWEWVGRGGSPAWALAWAPVWTARASCENGQ*

Sequence

>CNT30149774
CATTTAACTCATTGTAACATGTTGTAGATGAAAACACGTACACAATTACATAACTTAATAAATAAACACCCACACGTGCCTGATACACACCTCTCATCTC
TCTTTTTCTCACTCTCTCGGAAGACTGTTATTCTGGAGAGACTAATAAACAAAAGACGCTGGAAATGATGAAAGACCGACGAATCCAATCGAGCATGCAA
CTGATTTATAGCTCGGGTCCATGCATGGTTAGTGCTGAGCCGGAGGGTGGTAGATGGGCGTGGGGTGTTCTCCTCCATAGGTGGGCGTGGGAGTGGGTGG
GGCGGGGTGGTAGTCCGGCTTGGGCTCTGGCTTGGGCTCCGGTTTGGACGGCACGGGCTTCTTGTGAAAATGGTCAATGATGTGTTTCTTGAATGACATG
GGGTGCCCTCCTCCATAGCTAGGCGTTGGTGGGGCGGGGTGGTAGTCTGGCTGGGGCTGCGGCTTGGGCTCTGGCTTGGGCTCCGGATTGGGCGGCACAG
GTTTCTTGTGGAAATGGTCAATGATGTGTTTCTTGAAGGGCATGAGGTGCCCTCCTCCATAGGTGGGTGTGGGGGCAGAGTGATAGTCCGGCTGGGGATG
CGGTTTGGGTTCTGATTTCGGCTCCGGCTTGGGCGGCACGGGCTTCTTGTGAAAATGGTCAATGATGTATTTCTTGATGGGCTCGCACAATGTCGCCGAC
GCACACTCCGCCGATGGGTACTGGGTCTTTCCTCCGACAACACCAAATGTGTCCTCAGAAAGCGGCACGATCTTAGATGGCTCCTGCCCGGGGCACGGCG
CGTTGTTGGCCGCGCTGTGGAGCTGGGCGAGGCAGTCGGCGCCATGGAG