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Detailed information on CNT30149118


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673374Brachypodium distachyonSetaria viridis44.4152.1990.21143forward
CNT30381543Brachypodium distachyonManihot esculenta37.8912.5583.61122forward
CNT30553708Brachypodium distachyonOryza glaberrima33.2329.1685.98107forward
CNT30172707Brachypodium distachyonTrifolium pratense46.8928.6582.12151forward
CNT30144281Brachypodium distachyonMedicago truncatula34.1628.2883.64110forward
CNT3011502Brachypodium distachyonZea mays24.8413.786.2580forward
CNT30359398Brachypodium distachyonLactuca sativa34.1620.6882.73110forward
CNT30576411Brachypodium distachyonOryza barthii65.5340.6687.68211forward
CNT30604156Brachypodium distachyonOryza punctata24.8414.218580forward
CNT30556997Brachypodium distachyonPanicum hallii48.4544.5789.74156forward

Expression of CNT30149118

Peptides detected in this lncRNA

>peptide 1 (31 aa)
TNWCGVYSNSSQYFSIKHWCLTSSDFRDATK*

>peptide 2 (36 aa)
MWLITSATPTFSTAATESPPPMIVVTPFLLSSANFFA

Sequence

>CNT30149118
CACAAATTGGTGTGGGGTTTATTCAAACAGTTCCCAGTATTTCTCTATAAAGCATTGGTGTCTTACATCGAGTGATTTTAGAGATGCAACAAAATGAAGC
TTAGCCTCATACGGTCACGGATCCCACAGTGACAGCTTCATCCAATGCAACGACTCCAGGAAGTTGCTTTCCTTCCAACAACTCCAAGCTAGCACCACCT
CCCGTCGAGATGTGGCTCATAACATCAGCAACCCCCACCTTCTCAACAGCCGCAACAGAGTCTCCGCCTCCAATGATAGTCGTAACACCCTTTTTGCTAA
GCTCGGCCAACTTCTTTGCAAC