Detailed information on CNT30146035


BLAST search results

BLAST vs Swiss-Prot:
sp|P93111|HEM11_CUCSA, E-value = 2e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381485Medicago truncatulaManihot esculenta29.969.585.1474forward
CNT30567387Medicago truncatulaActinidia chinensis29.557.6386.373forward
CNT30172717Medicago truncatulaTrifolium pratense87.4515.2985.65216forward
CNT3022469Medicago truncatulaPopulus trichocarpa59.1144.9281.51146forward
CNT30118924Medicago truncatulaCitrus clementina30.3613.5489.3375forward
CNT30333724Medicago truncatulaCynara cardunculus33.615.3487.9583forward

Expression of CNT30146035

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MVGTVSNESLQASNCPDSSPMITCASIAFLSLSSLLAATTSLRSSTL*

Sequence

>CNT30146035
ACCCATTTTACCTAAACATTTCTCAAGCTCAGCAACCCTTAATCTTTCAGCATAAGCCCTTAATTTCTTAATGGTTGGAACAGTTTCTAATGAGTCTCTC
CAAGCTTCAAATTGTCCCGATTCTTCGCCGATGATCACTTGTGCTTCCATTGCTTTTCTTAGCCTATCCTCTTTGTTGGCAGCCACAACCTCTTTAAGAT
CATCAACATTGTAAACCTTAACAGACTCAAGGTCATCGACACATGAA