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Detailed information on CNT30145736


BLAST search results

BLAST vs Swiss-Prot:
sp|P12372|PSAD_SOLLC, E-value = 3e-66

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515464Medicago truncatulaJuglans regia20.4613.6985.53152forward

Expression of CNT30145736

Peptides detected in this lncRNA

>peptide 1 (52 aa)
KYVQQNKTVIKVNTCKLFSICHINKCDNISTCITYPIKQALSILTHQKVAYQ*

Sequence

>CNT30145736
AAAATATGTTCAACAAAACAAAACAGTCATAAAAGTAAATACATGTAAATTGTTTAGCATTTGTCACATAAATAAATGTGATAATATAAGTACATGCATT
ACATACCCAATTAAGCAAGCATTATCAATCCTTACACATCAAAAGGTTGCTTACCAGTAAATTTAACCTCAATTGGGCTAACATTCTTCCCAATAGACCT
GAAATTCTGACCAACCCCTTGACGACCAGGGTTAACCTTCTCAGGGTACACACCATCCTTAGGATGCAAATATTGAACCTCACCATTAGGAAAAACCCTG
TAAAACTGATACTTAATCTTGTACTTAGACCTTAATCTATTTCCTAAAGCCAAACACTGTTCTTTCCTTGCTAACTTAAGAAGGTGACTCCCATGTGATC
ACATAGAATTCTTCAACTTGTGCCTTACGTAACAATCCACCAGTGCTTCCTCCAAAGATTGGTGAAGGTGTGTTTGGGTCTAGTTCAGGAGCTTCTTCTT
TTGTTGTAACTGATGCTGCTTCTGTTTTCTCATCTGCAGCTGAGATTTTTGTTGTTTTTGTTGTGAACTTGATGGGTTTGAGAGAGATGAAGGATAAAGT
TGATGGTTGTTTCCATGGTTTAGGGCTTGAAAGAGGTGGAGTGAAGAGAGAGGCTTGAGTTGCCATTGCCATGTTGTTGATGAATGTTGAAGAAGAAGAA
GAAGAATGATGCTTATTTGTGTGAGTGAGAGTGAATGATGAAA