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Detailed information on CNT30144840


BLAST search results

BLAST vs Swiss-Prot:
sp|P93431|RCA_ORYSJ, E-value = 2e-62

BLAST vs NONCODE:
NONBRAT002426, E-value = 1e-82

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617865Medicago truncatulaSesamum indicum70.1980.8185.84219forward
CNT30727556Medicago truncatulaCorchorus capsularis90.3836.2988.3282forward
CNT30524690Medicago truncatulaPhaseolus vulgaris79.812591.97249forward
CNT30712287Medicago truncatulaGlycine max90.3818.3590.78282forward
CNT30223170Medicago truncatulaHordeum vulgare68.9144.2484.65215forward
CNT30171660Medicago truncatulaTrifolium pratense81.4177.6894.09254forward
CNT30662818Medicago truncatulaTriticum dicoccoides90.3876.0185.11282forward
CNT3075041Medicago truncatulaBrassica juncea48.7264.1490.13152forward
CNT30261189Medicago truncatulaBrassica rapa84.2972.2589.73263forward
CNT306924Medicago truncatulaZea mays86.2236.381.41269forward
CNT30218871Medicago truncatulaKalanchoe fedtschenkoi39.4228.2884.55123forward
CNT30208512Medicago truncatulaHelianthus annuus90.3841.7887.59282forward
CNT30355777Medicago truncatulaLactuca sativa84.2968.1389.35263forward
CNT30150829Medicago truncatulaBrachypodium distachyon50.9633.6983.65159forward
CNT3039667Medicago truncatulaMarchantia polymorpha20.1927.8888.8963forward

Expression of CNT30144840

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MMGTRALSSLLYIPGSWTLVGLSAMFMSVAFTIWLLTVYCVVPPIRPAPASRSLMNRQHIFPFLIMSAASRDQTLL

Sequence

>CNT30144840
GTCTTGTCTGGCCAATAGAATTTCTCCATACGACCATCACGGATGAGAGGAGCATAAAGTGTTGAGAAATCGTTACCGGTGACAATGATGGGCACACGAG
CGTTATCTTCCTTGTTGTACATACCAGGGAGTTGGACATTGGTGGGGTTATCAGCAATGTTCATGAGTGTGGCATTCACCATCTGGTTGTTGACAGTGTA
TTGTGTGGTTCCACCCATACGACCTGCTCCTGCATCGAGATCGTTGATGAACAGACAACACATCTTTCCCTTCCTGATAATGTCAGCGGCTTCACGGGAT
CAAACCTTGCTA