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Detailed information on CNT30144552


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379240Medicago truncatulaManihot esculenta16.7620.8385.5690forward
CNT30261873Medicago truncatulaBrassica rapa15.6430.1184.5284forward
CNT30643000Medicago truncatulaCannabis sativa26.8257.683.33144forward

Expression of CNT30144552

Peptides detected in this lncRNA

>peptide 1 (31 aa)
SFFFFERERHQIKLNIVHITKLHRKTLQKEK*

Sequence

>CNT30144552
AATCGTTTTTTTTTTTTGAAAGAGAAAGGCACCAAATTAAATTAAACATTGTACATATAACAAAATTACATAGGAAGACACTCCAAAAAGAAAAATAATA
ATAAAATTATCTCAAACTTGGAATCTTTTCCTTCCACCTAATAACACATTGAGAATGTTACAAGCACGTGCCATCACAACTTCTAGTAGTTGGATCGAAG
TTTGAGGCATTTGAATCAAGAACAAGAACTTTGTAATGCCTGCACACAAAAAAAAAACAAGCCAAGATTTTTTAGTCCAAGTTTTTATTTAAACCAAACA
TAATAGTAACATTAATTAAGGTAGATGCAATTACAAACCTCCAAGATCATTGGAGAAACTAGAATTTTCCCTCCTTAATAGCATCTTGATTAGCATCACC
AAGAGCAGCACCTTCCAAATACTTGTCTGCCAATTGAACTCTCTTCACATTCTCTTGTTCTGAGACAAGCATGTTACCATACTCCAATAGCTTTTCTAGT
GTCATCTTTGGCTGCTCAAACACTGTCCACCAACGAT