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Detailed information on CNT30144424


BLAST search results

BLAST vs Swiss-Prot:
sp|P46486|PSAF_FLATR, E-value = 2e-81

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30273262Medicago truncatulaChenopodium quinoa69.1220.4281.95338forward
CNT30194965Medicago truncatulaPisum sativum41.153.0388.56201forward
CNT3091235Medicago truncatulaSolanum tuberosum34.1513.9483.23167forward
CNT30173780Medicago truncatulaTrifolium pratense50.5151.8987.04247forward
CNT30313614Medicago truncatulaCamelina sativa29.8637.6380.14146forward

Expression of CNT30144424

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MSATAGSGDEMRIDESASAAENAFRFEFTSLVGFSWFGVKGVGFDL

>peptide 2 (50 aa)
LFLSRFLLITNSNQITPTNPSNPTSNIQKQYPWCDKLTPMSLITIHYQMW*

Sequence

>CNT30144424
CTCTTTCTGAGTAGGTTTCTTCTCATCACGAATAGCAATCAAATAACTCCTACCAACCCATCCAATCCAACCAGCAATATACAAAAACAATATCCCTGGT
GTGATAAACTCACCCCAATGTCTTTGATCACCATTCACTATCAAATGTGGTAAACCATCAGCACCACACAACAAACCTTGCTTTCCATAGTTATCAAACC
TTCTCTTGGTTTTCTCAACTGTTGCTTTTATGGCCAGCGCTGGAGCGCTGTCCGGAGCGTAAAGCTTGAGTGATGATTCAAGCTTTTTGATTGATTGTTT
CTCACGTTTGGCGAATTGTTTTGATTCTCTGCATGGTGTTAGGCCGGAGATGTCGGCGACAGCGGGGAGTGGTGATGAGATGAGGATTGATGAGAGTGCT
AGTGCTGCTGAGAATGCTTTTAGATTTGAGTTTACATCGTTGGTTGGTTTTTCTTGGTTTGGAGTGAAGGGTGTTGGATTTGATTTGTG