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Detailed information on CNT30144134


BLAST search results

BLAST vs Swiss-Prot:
sp|P46486|PSAF_FLATR, E-value = 4e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618119Medicago truncatulaSesamum indicum39.4640.1680.58206forward
CNT3019440Medicago truncatulaCitrullus lanatus34.8748.0281.87182forward
CNT30716553Medicago truncatulaMalus domestica golden25.119.9482.44131forward
CNT30623157Medicago truncatulaDaucus carota31.9916.8783.83167forward
CNT3038681Medicago truncatulaCucumis melo31.4240.981.1164forward

Expression of CNT30144134

Peptides detected in this lncRNA

>peptide 1 (81 aa)
LVVNKRNLDILGNEFTIHQLSISSNRNINNNLFLSRFLLITNSNQITPTNPSNPTSNIQKQYPWCDKLTPMSLITIHYQMW*

Sequence

>CNT30144134
CTTGTTGTAAACAAAAGAAACTTAGACATCCTTGGCAATGAGTTCACCATTCACCAACTCTCTATAAGCAGCAATAGGAACATCAATAATAATCTCTTTC
TGAGTAGGTTTCTTCTCATCACGAATAGCAATCAAATAACTCCTACCAACCCATCCAATCCAACCAGCAATATACAAAAACAATATCCCTGGTGTGATAA
ACTCACCCCAATGTCTTTGATCACCATTCACTATCAAATGTGGTAAACCATCAGCACCACACAACAAACCTTGCTTTCCATAGTTATCAAACCTTCTCTT
GAATGCTTTTAGATTTGAGTTTACATCGTTGGTTGGTTTTTCTTGGTTTGTGCTGCAGTGGATGATGTTGGTTGAGAGTTTTGGTTTTTGAGGTAATTTT
GGTCTTAGGGTTGAGGTGGGTTTGGAGAGGTTAGTTGGAATTGTTAGAGACATTTTTGTGTGGAAGAAGAAGAGAAGAGGGAGTGAAGGGTGTTGGATTT
GATTTGTGTGTTGTTATGGGAA