Detailed information on CNT30140763


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6YZY5|GL811_ORYSJ, E-value = 2e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30297939Lolium perenneTriticum aestivum76.4355.4481.78214forward
CNT30223789Lolium perenneHordeum vulgare93.2133.6381.23261forward
CNT30401458Lolium perenneTriticum turgidum39.2927.7887.27110forward
CNT30567662Lolium perenneActinidia chinensis21.0719.5486.4459forward
CNT30240671Lolium perenneAvena sativa9534.0681.2266forward
CNT30664982Lolium perenneTriticum dicoccoides101.4333.7783.45284forward
CNT3061946Lolium perenneArabidopsis lyrata23.2118.5286.1565forward
CNT30467363Lolium perenneSaccharum spontaneum90.7136.7180.71254forward
CNT307812Lolium perenneZea mays24.298.0388.2468forward
CNT30688822Lolium perenneTriticum urartu100.3635.0882.56281forward
CNT30573001Lolium perenneVitis vinifera21.077.5288.1459forward
CNT30102982Lolium perenneOryza rufipogon31.7929.6786.5289forward
CNT30117328Lolium perenneOryza nivara96.0758.181.78269forward

Expression of CNT30140763

Peptides detected in this lncRNA

>peptide 1 (46 aa)
GNGDSSWVLATKGSNCNSWLVRVGVELKVDEPLGKYKHISFVKHLG*

>peptide 2 (34 aa)
MSPSGNTNTSPLLSTLDRKLFSGLDVTKPTYNVP*

Sequence

>CNT30140763
TTGGCAATGGTGATAGCTCTTGGGTTCTGGCTACTAAGGGCAGCAATTGCAACAGCTGGCTTGTGAGGGTTGGGGTTGAACTGAAAGTGGATGAGCCCCT
CGGGAAATACAAACACATCTCCTTTGTTAAGCACCTTGGATAGGAAGTTGTTCTCCGGATTAGATGTGACGAAGCCAACATACAATGTACCCTAAAAAAC
TGTGAGGATCTCAGTGGCGCGAGGGTGCGTGTGTGGTGGGTTCTGACCTAAGGGTGCATAGTCTATGCGTGCTAGTGAGA