Detailed information on CNT30140632


BLAST search results

BLAST vs Swiss-Prot:
sp|O82709|CALX_PEA, E-value = 1e-32

BLAST vs NONCODE:
NONGMAT001818, E-value = 7e-19

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517641Lolium perenneJuglans regia75.4928.6287.01154forward
CNT30377662Lolium perenneArabidopsis thaliana64.2214.4984.73131forward
CNT30278532Lolium perenneChenopodium quinoa73.0413.5683.22149forward
CNT30629341Lolium perenneVigna unguiculata48.048.9782.6598forward
CNT30189101Lolium perenneSecale cereale84.3116.3794.19172forward
CNT30397803Lolium perenneTriticum turgidum84.3121.9194.19172forward
CNT30561418Lolium perenneActinidia chinensis64.221383.21131forward
CNT30144554Lolium perenneMedicago truncatula61.2714.682.4125forward
CNT30264134Lolium perenneBrassica rapa53.4312.5783.49109forward
CNT30605054Lolium perenneGossypium raimondii72.0625.9385.03147forward
CNT30126269Lolium perenneCorymbia citriodora71.5738.5281.51146forward
CNT30686469Lolium perenneTriticum urartu80.3929.0395.12164forward
CNT30366134Lolium perenneSorghum bicolor66.6721.5593.38136forward
CNT30120413Lolium perenneCitrus clementina42.1610.6387.2186forward
CNT30149228Lolium perenneBrachypodium distachyon85.2936.6387.36174forward
CNT30725707Lolium perenneLupinus angustifolius63.2423.4183.72129forward

Expression of CNT30140632

Peptides detected in this lncRNA

>peptide 1 (67 aa)
GASRFPCSWVGYLLIISNNNIVKQDAILHCPDLNSDGGNWIKVRLVKLKVLRVGDFLGLPDSLVAGVI

>peptide 2 (63 aa)
GLPDSLVAGLATFSSSAITILSNRMPSCIVQISIPMAAIGSKSGLSSSKYSGLGISWGFQIPL*

Sequence

>CNT30140632
GGGGCTTCCAGATTCCCTTGTAGCTGGGTTGGCTACCTTCTCATCATCAGCAATAACAATATTGTCAAACAGGATGCCATCCTGCATTGTCCAGATCTCA
ATTCCGATGGCGGCAATTGGATCAAAGTCAGGCTTGTCAAGCTCAAAGTACTCAGGGTTGGGGATTTCTTGGGGCTTCCAGATTCCCTTGTAGCTGGGGT
TATC