Detailed information on CNT30139217


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30459409Lolium perenneSaccharum spontaneum4.0128.5392.08101forward
CNT30583813Lolium perenneEchinochloa crusgalli2.9822.738875forward

Expression of CNT30139217

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MMGELHAPEGTLRCLVFFFFLVVIVMCYCILGIFWLYCSYNRSAVSDIGSCFGVISSLKCNVAK*

>peptide 2 (55 aa)
MVVSNIVITIHHRFLIVANLYTRSDYFFEGSWVSLYHFTISLPIQCNLSYKHSSV*

>peptide 3 (74 aa)
LNTRPASPATPSQLGRRPPLAPGGCLELPEDSRPRIARGGTKHEVVTALLAGKSQVRHRSRHRLRERRKRLSYL*

>peptide 4 (68 aa)
MIVYKYPITPDVFVMVLGQFDLLEVHTGIAFFDSSYEPEIDPDHLVSTDSALNYIIHLYNGFHIPIIC*

>peptide 5 (83 aa)
MIKYQLSKDMPSILVKSPYDHALWASCNNSLVVVFVQEITSRIPEKSYDGPASEQQSDLCCFVREYTTIVFSFLGLMYALKTL*

>peptide 6 (43 aa)
FKYPASVTRHTITARTQAAIGSGWLPGAPGGFEAQNCTRRHQA*

>peptide 7 (34 aa)
MLLKPCELVCWLTGSADVYYFLRPRHIFLWTGST*

>peptide 8 (39 aa)
MRTCANGLEVYKLMTVTYMAYDQVPALKGYALNLSQKPI*

>peptide 9 (51 aa)
MLLLLDGCFKYCYHYSSSFLDSCQSLYQIRLFFRRILGVTLPLYNIFAHTV*

>peptide 10 (33 aa)
MSAFANNYGTGHHVTTHLPARTLHLVVSCIHLN*

Sequence

>CNT30139217
CTTTAAATACCCGGCCAGCGTCACCCGCCACACCATCACAGCTCGGACGCAGGCCGCCATTGGCTCCGGGTGGTTGCCTGGAGCTCCCGGAGGATTCGAG
GCCCAGAATTGCACGCGGCGGCACCAAGCATGAGGTAGTAACTGCATTACTTGCCGGGAAGTCGCAAGTAAGACACCGAAGCAGACATCGCTTGAGGGAA
AGGCGCAAAAGATTATCATACTTGTGACTTTCTTGCAAGTTGTGCAGTTGCTGCCTCAAGCTTGCTGCCTCCCTTTGCCAGAGCTATCAGCAAAACAGAA
AGATCTGTCAGTTTCCTTGAACTATAAATTTTATATCACAAACTTAACCTGCAAATTAACAGCATAATGTGTTGATGATAGTCTATAAATACCCAATAAC
TCCAGATGTGTTTGTCATGGTATTAGGCCAGTTTGATCTACTTGAAGTACATACAGGTATAGCCTTCTTTGATTCGAGTTATGAACCAGAGATTGACCCT
GATCACCTTGTTAGTACAGATTCAGCTTTAAATTACATTATCCATTTATACAATGGGTTTCACATTCCCATAATTTGCTGAAAACAATATTGGTACTGTA
ATAATAGTCGTAGAAAAATTCTACCCAGATGAGTGCTTTTGCCAACAACTACGGAACAGGGCATCATGTGACCACACACTTGCCAGCCCGCACTCTGCAT
CTTGTCGTCTCCTGCATCCATTTAAATTAATCCTAACTACTTCAGGGGAGCCCTATTATACGTACATGTGGTCCAGCTAAAGAGTGCATGATTTCTCTGA
AACAAAGATAATCTGATTTCTATCTTGAGTCATATCCCATTGCTATGTTATAGCGAAAATCAGGTCCTAAATAGGTCCAGGTAGAAAAGTAATTCCATCA
GTAAGTTGGTCATGATGGGCGAATTGCATGCACCTGAAGGTACATTGAGATGCTTAGTTTTTTTTTTCTTTTTGGTGGTTATTGTGATGTGTTATTGTAT
TTTGGGTATCTTCTGGCTGTACTGTTCATACAATAGATCAGCTGTGTCGGACATTGGCTCATGTTTTGGTGTAATTTCATCTTTGAAGTGTAATGTCGCA
AAATAGGATAATGAAACCGGTGCATTCATGATTCTGCCGTTTCCTCGACATATACCAAATAGCAAAATAGTCACTAAACATATACCAAATAGCTAAATAG
TCACTAAACATATACCAAATAGCAAAATAGTCACTAAACAAAATTTCATGCTTTTGCTGTTGGATGGTTGTTTCAAATATTGTTATCACTATTCATCATC
GTTTCTTGATAGTTGCCAATCTTTATACCAGATCCGATTATTTTTTCGAAGGATCCTGGGTGTCACTCTACCACTTTACAATATCTTTGCCCATACAGTG
TAATTTGAGTTACAAGCATTCTAGTGTGTGATGTAAAGGAACATCTGACAGCTATTCTGAACTTCTAAGCTGCCACAACAGGTATGAATTTCTGGTCAAT
TGGATTCACTAAAAATATTGTGGTAAGATACCCAGCAGATTCAGCATGTGCTGTGTGATAACTTTTGGTTACGCACTTGTGTTATAGGGGTTGCTAGAGA
GTAGCGAGATACACTTCAACAATTGTAGTTCTTCAACAAGGGGTGCTGCGTCAAACACAATGTCCAGATTTTGACCCCTTATCCCAAGCATGACGGTGTG
TCATTGGCTGTTCTGATATGCAGAGGGGCCGAAGTGTGGCTTCATGAGGACGTGTGCAAATGGACTGGAGGTTTACAAGTTGATGACAGTTACATATATG
GCATATGATCAAGTACCAGCTCTCAAAGGATATGCCCTCAATCTTAGTCAAAAGCCCATATGATCATGCTCTATGGGCTTCTTGTAATAACAGTTTGGTT
GTAGTCTTTGTACAAGAGATCACCAGCAGAATTCCTGAGAAATCATATGATGGACCAGCAAGTGAGCAACAAAGTGACCTCTGTTGCTTTGTCAGAGAGT
ATACAACTATTGTGTTCTCTTTTCTTGGTTTGATGTATGCTCTTAAAACCTTGTGAACTCGTATGCTGGCTAACTGGTAGTGCTGATGTATATTACTTCC
TCCGTCCACGGCACATCTTTTTATGGACAGGTAGTACATAATTCTTGAACTAAAACCACGACAAAAATTATAGAACCGAGGGAGTACATCAGTTTGTGAT
GTCTGGTGTTCAGCATCTCTAATACGACTTGTCTTTTGAGGCTTCCAGGTACTAACCAGGCCACATAGAATGCAGAAACAACAATGGCTACAAGCCTAGA
ACCTATGTCCATGTAGCAGTAACAACCCCAGTGATGCCCTAAGTGGTAGTTTATCAATCGGTTACAGCTGCAAAATGTTGATGCTACAACCTATGACTTA
ACACCATATATGACATTATGGGTGTTGATTTTTATCAATATGATTCGTAACTGATCTATACCGTACAATAGTATCTTTCTTAAAGGATCTGTCGGGCGTA
TAGACAAATAAATAAAGC