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Detailed information on CNT30137282


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549182Lolium perenneIpomoea triloba16.5523.5987.3271forward
CNT30296213Lolium perenneTriticum aestivum30.7747.6596.97132forward
CNT30392802Lolium perenneTriticum turgidum34.0320.0595.89146forward
CNT30250012Lolium perenneAvena sativa22.1416.4191.5895forward
CNT30458448Lolium perenneSaccharum spontaneum29.1418.9486.4125forward
CNT301731Lolium perenneZea mays21.9116.2393.6294forward
CNT30683585Lolium perenneTriticum urartu34.0322.9995.21146forward
CNT30351207Lolium perenneEragrostis tef32.421.3293.53139forward
CNT30369692Lolium perenneOryza glumipatula25.4116.6488.07109forward
CNT30100365Lolium perenneOryza rufipogon32.6323.5386.43140forward
CNT30575092Lolium perenneOryza barthii28.6715.9786.99123forward
CNT3040612Lolium perenneMarchantia polymorpha31.4713.7890.37135forward

Expression of CNT30137282

Peptides detected in this lncRNA

>peptide 1 (50 aa)
TCSVNSFIRMRKYSIIQCTLVETLMQKSIHPKKTGLLKKTFAYGKESKYS*

Sequence

>CNT30137282
TCACTTGTTCCGTAAATTCGTTTATCAGAATGCGGAAATATAGCATTATTCAGTGTACACTAGTGGAGACTCTTATGCAAAAGAGTATACACCCAAAAAA
GACAGGACTGCTAAAGAAGACCTTTGCGTACGGGAAGGAATCGAAATACAGTTAAGCGAACTTTGACAATTTGCAGAAATTAACCATCACCACCACCCTC
GATCGAGAGAGTCGAGGACGTAACAATCATCGTTGCCGAAAGTAGGTATACTGGGGTTTTTGTGTGTGTGTGTTTAGAGGAGGAGCGTGGTCTCAGCGAT
CATGGAGGTGACGACGTAGGGGTCCATGTTGGAGGCGGGCCTGCGGTCCTCGAAGTAGCCCTTGCCCTCCTTCTCGGTGTCGCGGCCCACGCGGATGGAC
GCGCCGCGGTTCGCGACGCCCTGCAAGTC