CANTATAdb - search

Detailed information on CNT30136788

BLAST search results

BLAST vs Swiss-Prot:
sp|O49484|ASK11_ARATH, E-value = 6e-41

BLAST vs NONCODE:
NONZMAT002254, E-value = 7e-52

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30628805	Lolium perenne	Vigna unguiculata	19.4	20.6	85.45	110	forward
CNT30112966	Lolium perenne	Ficus carica	22.05	18.66	84.8	125	forward

Expression of CNT30136788

Peptides detected in this lncRNA

>peptide 1 (44 aa)
NFLNDIKVCHSKRIKNRQHKIKTNQNERRSADRMIALSTTIDQN*

>peptide 2 (30 aa)
MILRCAILKESRIGNIKLKQTKTKEEVLTE*

>peptide 3 (32 aa)
MLKVLRISSGVLPLIMSATVWQVRSSRPLMLR*

>peptide 4 (41 aa)
MRSKRVAWSTLTNSASQFLRSTAGAGAGAPSAAAAPSAAWTC

Sequence

>CNT30136788
GCAATTTCTTAAATGATATTAAGGTGTGCCATTCTAAAAGAATCAAGAATAGGCAACATAAAATTAAAACAAACCAAAACGAAAGAAGAAGTGCTGACAG
AATGATTGCACTATCAACCACCATCGATCAAAATTGAGGTCACTTTACAACTCTTTCGATCCAGCTAACTAGTGAATTGGATATGTAACTTTACAGCTTC
ACCGGGGCGATGTGGAGATAAAAGAAGCGTTGAAACGACGAGCAAACGCGGCAGTGTGCAGAATTACTCGAAAGCCCACTGGTTCTCCCTGCGGATCTCC
TCCTCCTCCTAGGGGGTGAAGTCGTTCTTGATGTTGAAGGTCTTGCGGATCTCCTCGGGTGTCTTGCCCTTGATCATGTCGGCGACGGTCTGGCAGGTGA
GGTCGAGCAGGCCCTTGATGTTGAGGTAGTTGGCGGCGAGGATGAGGTCAAAGAGGGTGGCCTGGTCGACCTTGACGAACTCGGCGTCCCAGTTCTTGAG
GTCCACGGCGGGGGCCGGGGCGGGAGCTCCGTCCGCCGCCGCGGCGCCGTCGGCCGCCTGGACGTGC