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Detailed information on CNT30135707


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640997Lolium perenneNymphaea colorata14.5534.9185.71133forward
CNT30223464Lolium perenneHordeum vulgare16.4174.2690150forward
CNT30391302Lolium perenneTriticum turgidum28.1251.8190.66257forward
CNT30576296Lolium perenneOryza barthii42.0181.5391.93384forward

Expression of CNT30135707

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MIGHPGADAGQPTAPFTAAGDGLSTGTMRASIAASGGGGGAAEQRPRCVGVWGIF*

>peptide 2 (31 aa)
MLIYTGLLSLSAVAIAVSICSCASSKLVTTA*

Sequence

>CNT30135707
GAGAAATAGTACTTGGGGGCGAGGAACAAGGGGACTGGATCCGGGGTAAAGGTGGGATGCAGTAGCCCGGGGAGATTGCAGCTGATGCTGATATACACGG
GCTTGCTCTCCCTGAGCGCCGTGGCAATCGCGGTGTCGATCTGCTCGTGTGCGTCGTCCAAATTGGTGACCACAGCCTGAATGAATTTAGGAACCAACGA
GATCAAGAGCCGCTCCTGAAGCCCAACTAGTTATTACAGCAATCAGGGACGACGCAAATGGTTGAAGAAAGAATACCTGGTAGCAAGTGATGGTCTGGAA
GCAGCGGAGCTCCTGGGAGAAGTCGGGGACGCCGATGGTGTGGTGGAGGATGCGGTTGGTGCCGTAGTCGTTGGAGTTGGGCCCTCCGGCGATGCAGATG
ACGGGGAGGTTCTCGCTGTAGGCGCCCGCGATGGCGTTGAGCACGCTGAGGCCGCCGACGGTGAAGGTGACGGCGCATGCGCCCACGCCGCGGGCGCGCG
CGTAGCCGTCGGCCGCGTACCCGGCGTTGAGCTCGTTGCAGCAGCCGACGAGGCGCAGGCCGGGCTCGGCGACGAGGTGGTCGAGCAGCGTGAGGTTGAA
GTCGCCGGGGACGGCGAAGACGTCGCCGACGCCGACCTGCACGAGGCGGCGCGCGAGGTGGCGCCCCAGCGACGCCGCACCGGCCGCGAGAGGCGCGGGG
TGGGAGGACATGATCGGGCACCCCGGCGCCGACGCCGGGCAGCCCACCGCGCCGTTCACCGCCGCCGGGGACGGCCTGTCGACGGGGACGATGCGGGCGT
CCATCGCGGCGAGTGGTGGTGGCGGTGGAGCGGCGGAGCAGAGACCTCGGTGTGTGGGGGTTTGGGGAATATTCTAGGACTCGCTGGAGATTTTGGTTTG
ACGTGTGTGGGTTG