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Detailed information on CNT30135649


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 1e-48

BLAST vs NONCODE:
NONGMAT000508, E-value = 6e-49

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671259Lolium perenneSetaria viridis49.5162.194.09254forward
CNT30523218Lolium perenneSetaria italica60.2356.5993.2309forward
CNT30703567Lolium perenneQuercus lobata40.7441.3984.21209forward
CNT3069058Lolium perenneQuercus suber45.4226.6381.97233forward
CNT30196946Lolium perennePisum sativum27.8819.9781.82143forward
CNT3042757Lolium perennePrunus dulcis55.9547.3681.88287forward
CNT30186872Lolium perenneSecale cereale61.7963.5395.27317forward
CNT30285178Lolium perenneTriticum aestivum61.2166.2496.5314forward
CNT30221015Lolium perenneHordeum vulgare47.3746.1195.06243forward
CNT30382783Lolium perenneTriticum turgidum61.2156.1795.86314forward
CNT3086297Lolium perenneVigna radiata56.5324.9484.83290forward
CNT30435210Lolium perenneAegilops tauschii61.2149.4596.18314forward
CNT30255927Lolium perenneAvena sativa60.4346.4895.48310forward
CNT30655816Lolium perenneTriticum dicoccoides61.2149.3795.86314forward
CNT30261175Lolium perenneBrassica rapa42.546.1978.9218forward
CNT30471244Lolium perenneSaccharum spontaneum61.432.9295.87315forward
CNT30679384Lolium perenneTriticum urartu61.2151.8295.86314forward
CNT30348363Lolium perenneEragrostis tef60.4355.6694.19310forward
CNT30370989Lolium perenneOryza glumipatula59.2648.6492.76304forward
CNT3024855Lolium perennePopulus trichocarpa50.143.7879.38257forward
CNT30147953Lolium perenneBrachypodium distachyon60.4335.6794.52310forward
CNT30101647Lolium perenneOryza rufipogon57.3131.5594.56294forward
CNT30496126Lolium perenneDigitaria exilis63.1647.6593.52324forward

Expression of CNT30135649

Peptides detected in this lncRNA

>peptide 1 (35 aa)
DHDNSRDNRIFTSQQQAPITSGTTFDTNTIDRYCP*

>peptide 2 (73 aa)
MSPEMRLTPPRRARRRIAGLVMPWMLSRSTFRWRLAPPLPSPLPPLPRPDISAARCLPFSGDEGGIGDFCSGSL

>peptide 3 (29 aa)
TMTILEITGFLLHSNRLPLHQAQHLTPTR*

Sequence

>CNT30135649
GACCATGACAATTCTCGAGATAACAGGATTTTTACTTCACAGCAACAGGCTCCCATTACATCAGGCACAACATTTGACACCAACACGATAGACAGGTACT
GTCCCTAAACAAGACCCACAGAGGCAAGCCTAGCCGCCGAAGCCGTAGAGGGTGCGGCCCTGGCGCTTGAGCGCGTAGACAACGTCCATGGCGGTGACGG
TCTTGCGGCGGGCGTGCTCGGTGTAGGTGACGGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGCACGCCGCGGGTCTCCTCGTAGATGAGCCCGGA
GATGCGCTTGACGCCGCCACGGCGAGCAAGGCGCCGGATCGCCGGCTTGGTGATGCCCTGGATGTTGTCGCGCAGCACCTTCCGGTGGCGCTTGGCGCCG
CCCTTGCCGAGCCCCTTGCCGCCCTTGCCGCGCCCAGACATCTCCGCCGCTCGCTGTCTTCCTTTCTCGGGAGACGAAGGAGGAATTGGGGATTTTTGTT
CTGGCTCGCTTCG