Detailed information on CNT30133681


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FWX8|AB12B_ARATH, E-value = 1e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690567Lolium perenneOryza sativa29.0120.2588.11286forward
CNT30629311Lolium perenneVigna unguiculata1428.8181.88138forward
CNT30552255Lolium perenneOryza glaberrima29.0142.9487.76286forward
CNT30342751Lolium perenneEragrostis tef19.9827.185.79197forward
CNT30106426Lolium perenneOryza longistaminata27.1835.8388.81268forward
CNT30582402Lolium perenneEchinochloa crusgalli26.8821.6583.02265forward
CNT30557760Lolium perennePanicum hallii48.7845.8185.65481forward

Expression of CNT30133681

Peptides detected in this lncRNA

>peptide 1 (93 aa)
MLIKTNGVPQSLLSGSPSLCPVHPEQPVQIQHPVHWLLHPEEGSLGPSQWHEQLQHAAFALQTIELHALLPLCHTPTIVQEDRKDWEDDSTND*

>peptide 2 (54 aa)
GVAYQNQNEVWSQKVNYYLNQTPTSSDIEVKRMIKFIIIIIYLVFMFHATHIYT*

>peptide 3 (41 aa)
MTLVCLIELQYLLFDLFYPGGLIPVAVSTGYKLPTGPLEAHG

>peptide 4 (75 aa)
MLLIYIRELNIYAKDQLVAFTSGPCYLFNLPRLHISSYMCYQKRNKLQHTLPGTILLAKRRLLNEGRRVTRMRHP*

>peptide 5 (59 aa)
MTPLMTEAMEPSMSTGISGLFRDARRLRGISCGISSHIFLDEPSWISIPRAIPNGTLNE*

>peptide 6 (56 aa)
WSSISEPKRSLVPEGKLLLESNANIIRHRGEKDDKIHHNHHLFGFYVPCYSYIYVN*

Sequence

>CNT30133681
TGGAGTAGCATATCAGAACCAAAACGAAGTCTGGTCCCAGAAGGTAAATTACTACTTGAATCAAACGCCAACATCATCAGACATCGAGGTGAAAAGGATG
ATAAAATTCATCATAATCATCATCTATTTGGTTTTTATGTTCCATGCTACTCATATATATACGTGAATTAAACATATATGCTAAGGACCAACTTGTTGCA
TTTACATCTGGTCCTTGCTATTTGTTTAATCTCCCCCGCTTACATATAAGCAGTTATATGTGTTATCAAAAGAGGAACAAACTTCAGCATACGTTGCCGG
GAACCATACTACTCGCTAAGAGGAGGCTGCTGAATGAAGGGCGACGAGTGACGCGTATGCGCCATCCTTGATGTTGATCAAGACAAACGGTGTGCCACAA
TCACTGTTGTCCGGTTCACCATCACTCTGTCCAGTGCATCCTGAACAACCCGTTCAGATTCAGCATCCAGTGCACTGGTTGCTTCATCCAGAAGAAGGAT
CTTTGGGTCCTTCACAATGGCACGAGCAATTGCAACACGCTGCTTTTGCCCTCCAGACAATTGAGCTCCACGCTCTCCTACCATTGTGTCATACCCCTAC
AATTGTTCAGGAGGATCGCAAAGATTGGGAAGATGACTCCACTAATGACTGAGGCAATGGAACCTAGTATGAGCACTGGGATCTCTGGCTTGTTCAGAGA
TGCGAGGCGACTGAGAGGTATTTCCTGTGGCATTTCATCACATATTTTCTTGGATGAGCCGTCCTGGATATCAATCCCAAGGGCCATACCAAATGGCACG
TTAAATGAATGATGGCTGCTGTTGTCATGAGATGACCTCTGGCTAGCTGACTGATTTGATGACACTTGTTTGCCTGATCGAACTCCAGTATCTCCTTTTC
GATCTGTTTTATCCTGGCGGCTTGATTCCTGTAGCCGTATCAACTGGCTATAAGCTCCCAACGGGTCCTTTAGAAGCTCATGGTGT