Detailed information on CNT30133582


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640394Lolium perenneNymphaea colorata5923.688.98118forward
CNT30316259Lolium perenneCorylus avellana35.522.2684.5171forward
CNT30221117Lolium perenneHordeum vulgare9889.0993.88196forward
CNT30564991Lolium perenneActinidia chinensis5024.7588100forward
CNT30541063Lolium perenneBrassica napus266.5592.3152forward
CNT30234760Lolium perenneBrassica oleracea2415.7489.5848forward
CNT30232947Lolium perenneAnanas comosus3428.6991.1868forward
CNT30706529Lolium perennePrunus avium52.56.8385.71105forward

Expression of CNT30133582

Peptides detected in this lncRNA

>peptide 1 (65 aa)
EREDHAAEGPGDALDADGGALGRGVVDAHDGEDGGHELGDARAVEGPGLELAGLEQRRRRGLLVVL

>peptide 2 (43 aa)
SAKIMPPKDQAMPWMPTEAHLDGELLTPMTVRMVAMNSAMPAR*

Sequence

>CNT30133582
GAGCGCGAAGATCATGCCGCCGAAGGACCAGGCGATGCCCTGGATGCCGACGGAGGCGCACTTGGACGGGGAGTTGTTGACGCCCATGACGGTGAGGATG
GTGGCCATGAACTCGGCGATGCCCGCGCGGTAGAAGGACCAGGACTTGAGCTCGCCGGGCTCGAACAGCGGCGCCGGAGGGGGCTCCTTGTAGTCCTTGT