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Detailed information on CNT30132649

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30696585	Lolium perenne	Oryza sativa	11.8	58.94	80.9	178	forward
CNT30179972	Lolium perenne	Secale cereale	24.39	50.27	85.6	368	forward
CNT30309159	Lolium perenne	Triticum aestivum	29.89	78.98	84.04	451	forward
CNT30220948	Lolium perenne	Hordeum vulgare	30.28	53.83	82.49	457	forward
CNT30435859	Lolium perenne	Aegilops tauschii	24.78	42.36	83.42	374	forward
CNT30658938	Lolium perenne	Triticum dicoccoides	28.56	57.85	82.6	431	forward
CNT30681115	Lolium perenne	Triticum urartu	4.31	27.2	92.31	65	forward
CNT30371172	Lolium perenne	Oryza glumipatula	7.55	27.4	85.09	114	forward
CNT30109239	Lolium perenne	Oryza longistaminata	12.19	33.95	84.24	184	forward
CNT30149781	Lolium perenne	Brachypodium distachyon	5.96	23.02	91.11	90	forward
CNT30103605	Lolium perenne	Oryza rufipogon	11.8	26.33	81.46	178	forward
CNT30577809	Lolium perenne	Oryza barthii	12.19	22.01	81.52	184	forward
CNT30498787	Lolium perenne	Digitaria exilis	8.42	21.03	81.1	127	forward
CNT30117627	Lolium perenne	Oryza nivara	11.8	27.09	81.46	178	forward
CNT30551656	Lolium perenne	Oryza brachyantha	11.8	20.87	83.15	178	forward

Expression of CNT30132649

Peptides detected in this lncRNA

>peptide 1 (98 aa)
MGLRLGLWLGRHGLLVVEVLQEMLLDWPAQSHGRTLWRRCGSLDAGDDTVGGALGDRDDLGRLLARARSVGGSIVELREAVGAVEVGGERHAEGAGTV*

>peptide 2 (46 aa)
MSTSSSVGGGGRDGVVVRMRLWLGLRLWRHRLLVVEVVKDVLLDRS*

>peptide 3 (32 aa)
MRLWLGLWLWWHGLLVVEVIKDVLFDWAQHGL*

Sequence

>CNT30132649
GTATAAAAACGTGTATAACTTAGACCCAATTAAATAAATTCATTCATATTTCCAAAAAAAAACACACCGATATTACAAGCCTTGGCAAAGAAACACACAT
TACCCGTACAATTGCTTGAAACCCATCTATCCTTCATAACTGTTATTTTGAACTCTGGGTTCTGGGGATACTTAAGAAAAGGGGGCAGAGAACTGTAGAA
ATACCAAAACCCACCGTGCATCCAACAGATCATAAATAGCAACGGCGTCGATCACTCACTGATCTGAACATGAAACCATATAGATTTCAGTGCTGGGAAG
GAGGGTGGTAGATCGGGGTCGAGGGGTGTCCACCTCCGCTGCCATAGGTCGGGGTGGGAGGAACGGGGTGATAGTCGGGGTGGGGTTGCGGCTTGGGCTC
TGGCTTGGGCGGCACGGGCTTTTTGTGGTGGAAGTGTTCTAGGATGTGCTTCTTGATCGGTCCTAACATGGTCTTTGATTCTGCGTGGTAGATCGGAGTG
GAAGGGTGTCCACCTCCTCCTCCGTAGGTGGGGGTGGGAGGGACGGGGTGGTAGTCCGGATGAGGCTGTGGCTTGGGCTCTGGCTTTGGTGGCACGGGCT
TCTTGTGGTGGAAGTGATCAAGGATGTGCTTTTTGATTGGGCCCAACATGGTCTTTGATTCTGCGTGGTAGATCGGAGTGGAGGGATGTCCACCTCCTCC
TCCGTAGGTGGGGGTGGGAGGGACGGGGTGGTAGTCCGGATGAGGCTGTGGCTTGGGCTCCGGCTTTGGCGGCACAGGCTTCTTGTGGTGGAAGTGGTCA
AGGATGTGCTTCTTGATCGGTCCTAGCATGGTGTTTGACGGCTCTGCGTGGTAGATCGGAGCGGAGGGGTGTCCACCTCCTCCGCCGTAGGTGGGGGTGG
GAGGAACGGGGTGGTAGTCGGGGTGGGGCTGGGGCTGGGGCTTGGGCTCCGGCTTTGGCGGCACGGGCTTCTTGTGGTGGAAGTGATCAATGATGTGCTT
CTTGATCGGACCCAACATGGTCTTAGACTCCGCGTGGTAGATCGGAGCGGAGGGGTGTCCACCTCCACCGCCATAAGTGGGAGTGGGAGGGACAGGGTGA
TAGTCTGGGTGGGGCTGTGGCTTGGGCTCTGGCTTGGGCGGTATGGGGTGATAGTCTGGATGGGGCTGCGGCTTGGGCTCTGGCTTGGGCGGCACGGGCT
TCTTGTGGTGGAAGTGCTCCAGGAAATGCTTCTTGATTGGCCCGCACAAAGTCACGGACGCACACTCTGGCGACGCTGTGGTAGTCTTGACGCCGGCGAC
GACACCGTAGGTGGTGCCCTCGGAGACAGGGACGACCTTGGACGGCTCCTGGCCAGGGCACGGAGCGTTGGAGGCAGCATTGTGGAGCTGCGCGAGGCAG
TCGGCGCCGTGGAGGTCGGCGGCGAGAGGCACGCTGAAGGCGCCGGAACCGTCTAGGCCGCCCACCGCCTTGCTCTCGTACTCGCCGTGGATGTTCTTGC
ACTTGATCG