Detailed information on CNT30131980


BLAST search results

BLAST vs Swiss-Prot:
sp|Q69UI2|RS131_ORYSJ, E-value = 1e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694623Lolium perenneOryza sativa33.5519.0288.83206forward
CNT30523595Lolium perenneSetaria italica21.019.8980.62129forward
CNT30307182Lolium perenneTriticum aestivum19.2231.2283.9118forward
CNT30436841Lolium perenneAegilops tauschii25.2423.3195.48155forward
CNT30688700Lolium perenneTriticum urartu19.2228.583.9118forward
CNT30350258Lolium perenneEragrostis tef31.9218.2890.82196forward
CNT30581348Lolium perenneEchinochloa crusgalli31.4318.6791.19193forward
CNT3064134Lolium perenneSelaginella moellendorffii12.736.9787.1878forward

Expression of CNT30131980

Peptides detected in this lncRNA

>peptide 1 (43 aa)
GSITNQLKNTKLQHIVHNLNFQGPNPDTVSANPQNTSLQVHER*

>peptide 2 (57 aa)
EASPTNSKIPNSNTLCIILTSKDQTLIQSQQTLKILLSRCMKDRLYSKAGCYSLLHS*

Sequence

>CNT30131980
GGAAGCATCACCAACCAACTCAAAAATACCAAACTCCAACACATTGTGCATAATCTTAACTTCCAAGGACCAAACCCTGATACAGTCTCAGCAAACCCTC
AAAATACTTCTCTCCAGGTGCATGAAAGATAGATTGTACTCCAAAGCTGGTTGTTACAGCTTACTACATAGCTAAAATCCAAAGGACTGGGTGTTACATC
TTACTGCATAGCTAAAAGTACTGCTTGCTACTTAAAAGAAAACCGAACTCCAAAGCTGTAGAGAGCCAAGTCACGGGAGCAAAGCTTAACCGAATCAGGC
GACGAGGGTGCTGGCGGTGGTGGAGTCGTACTTCCAGGAGGGGGCGATCTTCTTGTTGACGCGGTAGTAGCGGCTGAGGCGGTGGACCCTGCTCTCGACG
AGGATGAGGCGGAACTTGGCGTCCACGTCCGACCGGTTCCTCTCCAGGTGCTTCCTGATGGCGACGGCCTTCTTGACGAGGAAGTAGAGGTCCTCGGGCA
TGGCCGGGGCCTCCCGCTTGTAGGGCAGCACCGACGACGACATGCCCTTCCCGTTGCTGTGCATGCGACCCATGGCGGCGAGCGGCGGCGAGGAGGGTGG
TAGGAGAGTCTGCT