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Detailed information on CNT30131347


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7DNA1|CHI2_ORYSJ, E-value = 1e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30178594Lolium perenneSecale cereale51.362.6883.07189forward
CNT30226861Lolium perenneHordeum vulgare22.5537.0585.5483forward
CNT30553638Lolium perenneOryza glaberrima38.5931.9883.1142forward
CNT30448397Lolium perenneSaccharum spontaneum49.469.380.22182forward
CNT30370283Lolium perenneOryza glumipatula32.6114.5382.5120forward
CNT30103592Lolium perenneOryza rufipogon50.5461.3982.26186forward
CNT30116697Lolium perenneOryza nivara32.6113.8282.5120forward

Expression of CNT30131347

Nothing found.

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MPHSSPPLMMLVITPYPGTRPAALSAAVGVHRPVMTACDDGLFACGVIQNQSAVLKDTTASAA

Sequence

>CNT30131347
TTACAGTAGACGCCGGCGAGCGGCCGTATTCACTGCGCGGCGAGCCCGGTCGATGGCACACCTAAGTTGAAAGACCTCTGGCTGTAGCAGTCGAGGTTGC
TCCCGGTGTCGACGCCGAGGATGCTGCAGTACCGCTGGTAGAAGCCGATCCGGTCGGCCACACGGGGGTCTGGGCCGATGCCGCACTCGAGCCCGCCGTT
GATGATGTTGGTGATCACTCCGTACCCCGGAACGCGGCCGGCCGCGTTGTCGGCGGCCGTGGGCGTCCACCGCCCCGTGATGACGGCGTGCGACGACGGC
TTGTTCGCCTGCGGGGTCATCCAGAACCAGAGCGCCGTCCTGAAGGACACCACCGCGTCCGCCGCCAC