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Detailed information on CNT30129170


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30530112Corymbia citriodoraEucalyptus grandis81.1895.787.89289forward
CNT30131974Corymbia citriodoraLolium perenne29.2134.184.62104forward

Expression of CNT30129170

Peptides detected in this lncRNA

>peptide 1 (40 aa)
DFVSVGAVDVRGVEEGDAGVDGVVDERDHVGLGLGRGGEG*

>peptide 2 (93 aa)
MSAIMSGSDLGGAEKVDMPKQPRPCAETSRPCDPSLILLTAGAAIAAGLARGRCQKERTEKKQFESSPARSLDHFLHGDDNENDGRAELYGREE

Sequence

>CNT30129170
GGATTTCGTTAGTGTGGGGGCCGTAGACGTCAGAGGTGTCGAGGAAGGTGACGCCGGAGTCGACGGCGTGGTGGATGAGCGCGATCATGTCGGGCTCGGA
CTTGGGAGGGGCGGAGAAGGTTGACATGCCCAAGCAGCCCAGACCCTGCGCCGAGACCTCGAGACCCTGCGACCCCAGCTTGATCCTCCTCACCGCCGGC
GCCGCCATTGCCGCCGGTCTAGCTCGAGGTCGATGCCAGAAGGAGAGAACGGAGAAGAAACAGTTCGAGAGCTCGCCCGCTCGCTCTCTCGATCACTTCC
TGCACGGAGACGATAACGAAAATGACGGGCGAGCCGAGCTTTATGGTAGGGAGGAG